Gene CPF_0155 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_0155 
Symbol 
ID4200997 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp182521 
End bp183552 
Gene Length1032 bp 
Protein Length343 aa 
Translation table11 
GC content35% 
IMG OID638081036 
Producthypothetical protein 
Protein accessionYP_694619 
Protein GI110798933 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1299] Phosphotransferase system, fructose-specific IIC component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.021711 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAGTTT TAATTGGGGC AGGACTTTTA TTAATAGTTT TAGGATTGTT TACCTTATTT 
AGTTATAAGG CACCACATGG AATGAAGGCT ATGGGAGCAT TGGCAGGAGC AGCTTGTGCA
AGCTTTTTAG TTGAGGCATT TCACTCATCA TTCTTTGGAA ATGTTCTAAA TATAGAGTTT
TTAAAGAAGG TTGGAGATGC TAATGGAAGC TTGGGAGGAG TTGCAGCAGC AATCCTTGTA
CCATTAGCTT TAGGAGTTTC ACCAGTTTAT TCAGTTTTAA TAGGACTATC ATGTTCAGGA
TTAGGAATAT TACCAGGATT TATAGCAGGT TATTTAATGT CATTTGTGGT TAAATTCTTA
GAAGAAAAAT TACCAAGTGG TTTAGATTTA ATTGTAATAA TAGTTGTGGC TACGCCTCTT
ACAAGAATAA TAGGTGATTT TACAGCACCA GTAGTTGATT CTACTTTATT AAAAATAGGA
CAGGTTTTAA TAGCTTCAGC AAATTCTAAT CCAATAACAA TGGGAATAAT ACTTGGAGGA
ATTATAACTG TAGTTGCTAC GGCACCTTTA AGTTCAATGG CTTTAACAGC TATGCTTGGA
CTAACAGGAG CACCAATGGC AATAGGAGCA TTATCAGTTT TTGGTTCATC TTTCTTAAAT
TTTGTTTTAT TCCAAAAAAT GAAGTTTGGA AGCAAAAAAG ACACAATATC AGTTGCCATA
GAACCATTAA CGCAGGCGGA TATAATAACA GCTAACCCTA TTCCTATTTA TGTAACTAAT
TTTATTGGTG GCGCTTTATG TGGGATTATA ATAGTTTTAA TGGGACTTAC TAATATGTCT
CCAGGGACAG CTACCCCTAT TGCTGGTTTT GCTGTAATGT TTGCATATAA CCCAGCATTT
AAGGTATTAA TGGCTTCTCT AGCTTGTGTA GTTGTAAGTG CAGGTAGTGG ATACCTAGGG
TATTTATTAT TTAAAAACTA CAAAATACAT ACAGTAGATG AGATACGTGG AAATGATTTA
GAGGTAGAAT AA
 
Protein sequence
MQVLIGAGLL LIVLGLFTLF SYKAPHGMKA MGALAGAACA SFLVEAFHSS FFGNVLNIEF 
LKKVGDANGS LGGVAAAILV PLALGVSPVY SVLIGLSCSG LGILPGFIAG YLMSFVVKFL
EEKLPSGLDL IVIIVVATPL TRIIGDFTAP VVDSTLLKIG QVLIASANSN PITMGIILGG
IITVVATAPL SSMALTAMLG LTGAPMAIGA LSVFGSSFLN FVLFQKMKFG SKKDTISVAI
EPLTQADIIT ANPIPIYVTN FIGGALCGII IVLMGLTNMS PGTATPIAGF AVMFAYNPAF
KVLMASLACV VVSAGSGYLG YLLFKNYKIH TVDEIRGNDL EVE