Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_0133 |
Symbol | rbr |
ID | 4202607 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | + |
Start bp | 159162 |
End bp | 159749 |
Gene Length | 588 bp |
Protein Length | 195 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 638081014 |
Product | rubrerythrin |
Protein accession | YP_694597 |
Protein GI | 110801055 |
COG category | [C] Energy production and conversion |
COG ID | [COG1592] Rubrerythrin |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.000905635 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAGTT TAAAAGGTAC TAAAACTGCT GAAAATCTAA TGAAATCATT CGCTGGTGAA TGCCAAGCAA GAACAAGATA TACTTATTTT TCAAGTACAG CTAGAAAAGA AGGTTATGTT CAAATATCAA ATATATTTTT AGAAACTGCT GAAAATGAAA AAGAACACGC TAAGAGATTT TATAAATTCT TAAAAGACGA TCTTCAAGGA GAAGCTGTAG AAATAAATGC TGCTTACCCA GTAGAATTAC CTACAGATAC ATTAACTAAC TTAAAATTTG CTGCTGACGG AGAACATGAT GAATTAAGTA ATCTTTATCC ATCATTTGCT GATGTAGCTG ACGAAGAAGG ATTCCCAGAA GTAGCTGCTG CTTTCAGAAT GATAGCTAAA GCAGAAACTG CTCACTATAA TAGATTTATG AAATTAGCTA AAAACATTGA AGAAGGAAAA GTATTCAAAA AAGATGAAGT AGTACTTTGG AAATGTGGAA ACTGTGGATT TATTTGGGAA GGTGCAGAAG CTCCATTAAA ATGCCCTGCA TGCTTACATC CACAAGCTTA CTTTGAAGTT TTCAAAGAAA CTTATTAA
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Protein sequence | MKSLKGTKTA ENLMKSFAGE CQARTRYTYF SSTARKEGYV QISNIFLETA ENEKEHAKRF YKFLKDDLQG EAVEINAAYP VELPTDTLTN LKFAADGEHD ELSNLYPSFA DVADEEGFPE VAAAFRMIAK AETAHYNRFM KLAKNIEEGK VFKKDEVVLW KCGNCGFIWE GAEAPLKCPA CLHPQAYFEV FKETY
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