Gene CPF_0129 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_0129 
Symbol 
ID4202534 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand- 
Start bp154296 
End bp155189 
Gene Length894 bp 
Protein Length297 aa 
Translation table11 
GC content30% 
IMG OID638081010 
Producthypothetical protein 
Protein accessionYP_694593 
Protein GI110799419 
COG category[E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only 
COG ID[COG0697] Permeases of the drug/metabolite transporter (DMT) superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.31523 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATTCAA AATTTAAAGG AATTATTTTT ATGATACTTG CCTCAGCAGC CTTTGCTACT 
ATGAATCTAC TTAGTAAGCT AGCTGTAGGA GTTAACTCAT ATCAAAAAAC TTTTTTGACA 
AATGTTGTAG CAACCTTAAT AGTTTGCTTT ATAATAGCCT ATAAAAAAGG CTCTTTTTTT 
GGAAAAAAAG AAAGTAGAAA ATATTTGCTA GTTAGAGGGG TTACAGGTAC TCTATCCATA 
CTAACAAACT ATTATGCCTT AGATAAAATG TTTTTATCCG ATGCAACAAT ACTAACTAAA 
TTAGCACCAT TCTTTACAAT AATTTTTTCT TACTTATTAA TTAGCGAAAA AATTACTAAA 
AAACAATTTA CACTTTTAAT AGTAGCCTTT GCAGGAAGCT TATTTGTAAT AAAACCTCAA 
TTTAGTACTG CTATAATTCC ATCCCTTATC GGCGTAGCCT CTGCTGCCTT TGCAGGAATA 
GCATACACAA TGATAAGAGT GATTGGCGAT AAAGAAGACT TCTGGACAAT AATCTTGTCC 
TTTACAAGCA TAGCTACTAT TGTTATGTTA CCTTCAATGT TTATGAACAC AGATAATTTA 
ACACTACAAA ATATACTTCT ACTTGTTAGT GCAGGAATAG CTTTCACATT AGGACAAGTT 
GCCTTAACCA TAGCTTACAA AAATGCTCCA GCATCTGAAA TATCAATGTA TGATTACATT 
GGGCTTATTA TAGCAGCTAT ATATGGCTTT ATGTTCTTTA AAGAAATTCC AGATTTCTTA 
TCATTTACAG GGTATATAAT AATAGTTGGC TCTTCACTTT TAAATATTTT AGGAAATAAA 
AAGACTTCTA ATAAAGAAAT AAATGAAGAT AGCTCTTTAG TTTCTACAGA TTAA
 
Protein sequence
MNSKFKGIIF MILASAAFAT MNLLSKLAVG VNSYQKTFLT NVVATLIVCF IIAYKKGSFF 
GKKESRKYLL VRGVTGTLSI LTNYYALDKM FLSDATILTK LAPFFTIIFS YLLISEKITK 
KQFTLLIVAF AGSLFVIKPQ FSTAIIPSLI GVASAAFAGI AYTMIRVIGD KEDFWTIILS 
FTSIATIVML PSMFMNTDNL TLQNILLLVS AGIAFTLGQV ALTIAYKNAP ASEISMYDYI 
GLIIAAIYGF MFFKEIPDFL SFTGYIIIVG SSLLNILGNK KTSNKEINED SSLVSTD