| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_0122 |
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| Symbol | |
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| ID | 4203414 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens ATCC 13124 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008261 |
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| Strand | + |
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| Start bp | 142898 |
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| End bp | 147187 |
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| Gene Length | 4290 bp |
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| Protein Length | 1429 aa |
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| Translation table | 11 |
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| GC content | 28% |
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| IMG OID | 638081003 |
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| Product | Cna B domain-containing protein |
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| Protein accession | YP_694586 |
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| Protein GI | 110798879 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4932] Predicted outer membrane protein |
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| TIGRFAM ID | [TIGR01167] LPXTG-motif cell wall anchor domain
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAATATTA TAAAAAAGAA TTTTAGGTAC CAAGTATTTG CTTTATTTTT AATACTACCA
TTTATTACAA ATATGTTTAG CAGTTTATTT GTTGTATATG CTAAGGATGT TAATTTTTTT
ACTGATGATT TATACTTTAG CAGTGATAAT AAAATTATTT CATCCCAAAA TTCTAGTCCA
ATAAAAGTAA AAGTTAATTC TTTATTAAAC TTTGAATTAT CTTCAGATAA TTTAGAAGAT
TCAACCGTAG AAGTTATATT ACCAAAGGGG ATTTCTCTTA ATGAAAAAGA AACTATAAAG
TTTAGCAACA ACTCTGTAGT TAAGGAAACA ACTAAAGATA GTCTAGAAAA GTTGATATTT
AAATTTGATC AACAAAAAAG AAAGATTAAT TTTGTTTTAA ACATTAATCA AACAGGAAGT
TTTGAGTTTT TTGCTCAAAC TCATAGAAAA AATGGAAAAT ATTATAAGTC TTATTCAGTA
AAGATTAATA GTGAAGATTT AAATAACAAT TTTTCAAATG AAAAAAAAGC TGACATAAAT
GTTGAGACAA AAGAAAATAC TTCATTTTAC AATTCAAGTA ATAACATAAT TGCTAATGAA
GTAAAAGAAA ATGATTTATC AAAAAGTGTA GAAAAAAAAG GAATTAATGT GGATTTAACT
TATGAACCTA TGAATTCAGA AATTTATTCA GGAGAGACTG GGGTTTATCA ACTAAATTTC
AAAGTAACAG GATCTACAAT AAATATTGGA AAAGCAACCT TAGAAATTAG TTTACCAAAC
ACTAATGGAG GAGAGACTGC ATTAGGATCA TCATTGGATG AATTAGAAAT AGAAGGTGTG
AAGCCAAGAT ATGATAAAGA TTTAAATAAG TTGGTTTATG AATTTACAAG TTTAAAGTCT
GGACAATCTT ACCGTACAGT TGTAAAAATT ATAACAACTA ATGGTATTGT TGGGAACGAT
TCTAAAATGG TTTCGAAGGC TACTTTGATT AAAAATGATT CTCCTACTAT ATCAAGTGGA
GATGTAGTTA TTAATGTGAA ATCAGAAACA CCTGTATCTA TCACCAAATC TTATATTGGT
GTAAAAGATA AAAGTCCAGA TTATAATCCA AAGCCTGGAG ACATAATAGC GTGGAAAGTA
AATGCTTCAG TAAAATATAA AAAGACAGGA TTAGCTTTTA TAAAACCAGG TACTAATATA
ACTATTTCTG ATGCTATTCA ACCAGAGTTA ACATACAATA GTACAACAAG TTCAGTGAAT
CCAGAATCAA ACAATAATAT TTTGACTTGG AACTTTAAAG CTCCAGATAT TGAATCTCAA
AAAAAGTTAG CAGATTTAGA AAATGATATA TGGACCACTA GTTTTATTGT TTATACAAAA
GTAAAAGATA CAGTAAAGGA CTATTTAATA GTGTCAAATA AAGTTGATTT TTCTTTAACA
AATATAAGCA ATTTACCTGT TCAAAATAGT TCAAATGTTG CTTATGCAAC AATTGCAAAA
GGAGGAGTAA ATATCTCTCC AGTTTATGGT AATTTTTATA CAGGAGTAAA CACAGGACCG
GCAAATGGCT TTGGTGCATT AGCTAATGTA CTTTCACCAA ATCCAGAACC AGTTGTAACT
GATACTGCAA ATCTTGGATT CCAACTTCAA TATAGGATTG TTCCAGGTAG ATATTGGAAT
GTTAATAAAA ATATGCCTAA GCCATCTCCT CCTAATCCAG AAAATGATTC GATTGTTACT
GATTCTAAAG GGAAGTTTTA TCCATTAAAT ATTTTTTCTC TCTTAAAAAA TGGTTATAAA
AATATTTCCT TATATAGAAT TATTGATACA AATTTAAATT TACAAGGAAT AGATTTTTAT
GTACCTAAAA AGAGAGCTCA AACAGATGAA CCTATGGGAT ACTTTTCAAA GATTCCTGAT
ACTACTGTCG TAATGGAGGT AAACTCTAAA GATAATTTTA TTAGTAAAGA AGTATCATAT
GATAATATTA GCTTTTCATC TAATGGAAAT GGATATAAAC ATTTAACTAG AGAAGAGTTA
GGGTTAAGTC CTAATGACAA GGTTCTTTCA TATACAGTTA AATATGAAAA TAAAGATAAT
TCAGTAATAG CAGGGAATTT TCAAGTGAAT GTAAATGATT ATTATGGTAT TAAACAAGGG
TATGTAGGTA AGGTAACAAA TACTAGTTAT TTTAGTGCAA CTTTATCTGA TGGTACATTA
TTTTATAGAA AACCGAATCC GGATTTAGAT GATAAATCTA CTGTTGGTCC TAGATCAGCT
ATTGTAGTTG CACAAGAAAA ATATAATCCT GTAGCTAGAT TAGAGGCTTA TCTTCAAAAG
GCTTCTGGAA ATGTAGTTAC CTTAGGGGGA AATCGTTTGC AAGTAAACTT CTTTAATGAC
TATTCTTCAC AAGCAGATAT GAGTGAACCG TTAATGGTAA GTGTACTACT TCCTAAAGGT
GTATTTGTTA ATACAAAAAA TCCAGATGAA AAAATGAGTT ATTTTGATAG AAAAGGAAAT
GAGGTAAAGG ATGGTGGAAG ATATGTAGTA ATAGACAATT ATAATGGTAC AGGTCAGCAA
CTTATTCGTG CAACTTGGGA TAAAAAATTA TTACATCCAA ATGAATACTT AAATTTCGCA
GTAAATGTAA ATATTACAGT TGATACGCCA CAACAATCCA AGGTAATTGC TTATGGTACT
AGTGGAAATC AAGTTTTAGA GGCGCCGGTT ACATCAGATC ATTATTCAAT TAAAGAAAAT
GATAGTGATG ATATAAATGG AGATAATGAT ACAATGCAAA TTCGCATAAA AACAGAACAA
GATTATCAAG TTGCAGGTAA TAAAAATTTA ATTATTACTA AAGAAGTAAA AGGTAATCTT
GATAAAGATT ATTCAAAATT TGGTCATGTA AATATTGGAA AGCAGTTTTC ATATCGATTA
ACACTAAATA ATACTACAGG AGAAAATATT CAAAAATTAG GTTTTATTGA TGTTTTACCA
TCTGTTGGAG ACTTAGGTAT TACTGATAAT GTAAGTAGAG GTAGTATGTT TACCCCTACA
CTTGTAGGTG AAATAGTAGT ACCTGATTCT TGGAAGGGAA AGACAACAGT TTACTATAGT
ACTGCGAAAA ATCCTAGCAG AAGTGATTTA TATAAATATG TTGATTATCC AGCAAATGCT
GTAAGACCAG TCAATCCACC TAATGCTGAA AACCCTGAAT GGAAAACAGC AAACCAAGTT
AGCGATTGGA GTGAAATTCA TAGTTTCAAG ATAGAACTAA ATCAAGGAGC AAATTGGGTG
CCAGGACAAA ATTTAAGTAT GACATTTAAT ATGCAAGCTC CAGTTAATCC TGATAAATCT
TTATTAGATA AAAATATTCC AGAGTTAGAG CGTGCTGCAT GGAATTCATT TGCAGTAACT
ACAAATGGAT TATTGGCAGT AGAACCTCAA AGAGTAGGAA TAGTAATTGT AGATTCAGAA
GTTACTATTA ATCTTAATAA AGTTGATGCT TCTAATGGAA ATGTTTTACC AGGAGCACAT
TTTAAGTTAT TGAATGAAAA TAAAGAAAAT ATTTCAGAAC TTGAAACAAA TGATAAAGGA
AATTTGACAT TTAAAAATAT AAATTCAGGT ACTTATTATT TAGAAGAAAC TAAAGCACCG
TTAGGATATA AATTAAATAA TAAAAAGTAC AAGATTATTA TTTCTAAAGA TGGACAAGTA
ACCGTTGATA ATATTGATGA TAACTTAAAT ATATTAAGCA GTAAAATAAA TGAAATTTCA
TTAGTTATGA AAAATAATGA ATTATTAGGA AGCATAAAAA TTAAAAAAGT TGATAGAGAT
GACACGAAAA AAGTTTTAGA AGGAGCTTCA TTTGCAATTG CAACAAGTGA GGAAGATGCT
TTAAACAAAA GATTTATTAA AGTTAGCAAT AATGGAGAAT TAGTATACCC TAATGATAAA
AGATATAATG ATCAATTAAA GAATTACGAA GTTATATCTG ATAAAAATGG TTTAGCTACT
TTCTCTAATT TAAAACTAAA CGAATCAAAT GGAAATATTT ATTATTTAGT TGAGACTAAG
GCTCCAAAAA ATTATGAGTT ATTAGATACG TATTTGAAAG TGACAGCAAC AGAAGAAGGA
GCAGAATCTT TAATATTAGT AAAAAACAAA AGAAACTTAG TAATGCCAAG CACAGGAAGT
AATTTGATTT TAGTTTATAT AATAAGTGGT TTATTTATTA CTATTACTAT GTTATTTATA
TTTTTCAAAA AAAGTAGAAG ATATATTTAA
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| Protein sequence | MNIIKKNFRY QVFALFLILP FITNMFSSLF VVYAKDVNFF TDDLYFSSDN KIISSQNSSP
IKVKVNSLLN FELSSDNLED STVEVILPKG ISLNEKETIK FSNNSVVKET TKDSLEKLIF
KFDQQKRKIN FVLNINQTGS FEFFAQTHRK NGKYYKSYSV KINSEDLNNN FSNEKKADIN
VETKENTSFY NSSNNIIANE VKENDLSKSV EKKGINVDLT YEPMNSEIYS GETGVYQLNF
KVTGSTINIG KATLEISLPN TNGGETALGS SLDELEIEGV KPRYDKDLNK LVYEFTSLKS
GQSYRTVVKI ITTNGIVGND SKMVSKATLI KNDSPTISSG DVVINVKSET PVSITKSYIG
VKDKSPDYNP KPGDIIAWKV NASVKYKKTG LAFIKPGTNI TISDAIQPEL TYNSTTSSVN
PESNNNILTW NFKAPDIESQ KKLADLENDI WTTSFIVYTK VKDTVKDYLI VSNKVDFSLT
NISNLPVQNS SNVAYATIAK GGVNISPVYG NFYTGVNTGP ANGFGALANV LSPNPEPVVT
DTANLGFQLQ YRIVPGRYWN VNKNMPKPSP PNPENDSIVT DSKGKFYPLN IFSLLKNGYK
NISLYRIIDT NLNLQGIDFY VPKKRAQTDE PMGYFSKIPD TTVVMEVNSK DNFISKEVSY
DNISFSSNGN GYKHLTREEL GLSPNDKVLS YTVKYENKDN SVIAGNFQVN VNDYYGIKQG
YVGKVTNTSY FSATLSDGTL FYRKPNPDLD DKSTVGPRSA IVVAQEKYNP VARLEAYLQK
ASGNVVTLGG NRLQVNFFND YSSQADMSEP LMVSVLLPKG VFVNTKNPDE KMSYFDRKGN
EVKDGGRYVV IDNYNGTGQQ LIRATWDKKL LHPNEYLNFA VNVNITVDTP QQSKVIAYGT
SGNQVLEAPV TSDHYSIKEN DSDDINGDND TMQIRIKTEQ DYQVAGNKNL IITKEVKGNL
DKDYSKFGHV NIGKQFSYRL TLNNTTGENI QKLGFIDVLP SVGDLGITDN VSRGSMFTPT
LVGEIVVPDS WKGKTTVYYS TAKNPSRSDL YKYVDYPANA VRPVNPPNAE NPEWKTANQV
SDWSEIHSFK IELNQGANWV PGQNLSMTFN MQAPVNPDKS LLDKNIPELE RAAWNSFAVT
TNGLLAVEPQ RVGIVIVDSE VTINLNKVDA SNGNVLPGAH FKLLNENKEN ISELETNDKG
NLTFKNINSG TYYLEETKAP LGYKLNNKKY KIIISKDGQV TVDNIDDNLN ILSSKINEIS
LVMKNNELLG SIKIKKVDRD DTKKVLEGAS FAIATSEEDA LNKRFIKVSN NGELVYPNDK
RYNDQLKNYE VISDKNGLAT FSNLKLNESN GNIYYLVETK APKNYELLDT YLKVTATEEG
AESLILVKNK RNLVMPSTGS NLILVYIISG LFITITMLFI FFKKSRRYI
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