Gene CPF_0114 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_0114 
Symbol 
ID4203796 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp134977 
End bp135777 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content23% 
IMG OID638080995 
Producthypothetical protein 
Protein accessionYP_694578 
Protein GI110799956 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000247696 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTTGTT CAAAGTGTGG TAAGGAAATA CCAAATGAAT CAGTTTTTTG TCCAGAGTGT 
GGAAATAAGT GTAAGGGTTC TAGTAAAAGT ATACCTATAG ATGTAAATGA GCATAAAGGA
TATATAATAA AATCTTTATG TCATCCAATA ACTTCAGTTA AGGAACATGT CTTTGGAGTA
TCATCAAAAA TACAATTAAT TTATATTGCA ATAATAACTT TAATAATACC ACTAGTTAAA
ACTCTTTTAT TTAAAGCCTT TAGTTTTAAC TTAGTAAAAA GTGTAGTAGG CATTATACTA
GAATTCTCAA ATATTAATAC CTGGGATTTT AATAACATGA TAAAGGCTAA AAGTCAGTTT
GATATGATTA TGGAAAATGT ATTTCCTACA GGTAATATCT ATTTTTTAAA TTTAGGAAGC
TATATAATTA ATTATGCTTT AATATTAGGT ATAATTTATA TTATATTTAA GTTTTTAGTT
AAAGAAGATA TAAATAAAGA TTCACTTGTA AACATAATGT TTGTAGTATC TATAATAAAT
GTATTTATAT TAATAATATC CTCTATAGCC CTAGTTTTAG GAGGAGCTAT TTGGATGATA
GTAAGTATAT TTAGTTCTAT ATTATCAGTT GTGTTATTGT ATGCTTTATT TAATACTTTA
ATAAAATCAA AAAATAAATT TATATACATA TATTCTTTAA CTTGCATGGT TGTTTATTCA
ATAAACGCAT GGTTTGTTTT TAATAATGTA TCATCTATAA TTTATCAAAT TTATTATAAT
TTAGAGAGAT ATTTTATTTA A
 
Protein sequence
MFCSKCGKEI PNESVFCPEC GNKCKGSSKS IPIDVNEHKG YIIKSLCHPI TSVKEHVFGV 
SSKIQLIYIA IITLIIPLVK TLLFKAFSFN LVKSVVGIIL EFSNINTWDF NNMIKAKSQF
DMIMENVFPT GNIYFLNLGS YIINYALILG IIYIIFKFLV KEDINKDSLV NIMFVVSIIN
VFILIISSIA LVLGGAIWMI VSIFSSILSV VLLYALFNTL IKSKNKFIYI YSLTCMVVYS
INAWFVFNNV SSIIYQIYYN LERYFI