Gene CPF_0112 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_0112 
Symbol 
ID4202002 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp132430 
End bp133599 
Gene Length1170 bp 
Protein Length389 aa 
Translation table11 
GC content23% 
IMG OID638080993 
Producthypothetical protein 
Protein accessionYP_694576 
Protein GI110800644 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00718309 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATTTT GTACTAAATG TGGTAATAAA CTATCTGATT CAATGAAATT TTGCAATAAG 
TGTGGTGCTA AGGTAAAATC TGTAGATAAA GATACTAAAA ATAACTCAGA TACAGAAGAT
ACAAAAGATA AAAAAGATAT TCCTAACTCT AAAAATAATA TTGATAAAAC CATAATCTTA
GATGCACCTA AAATAAAAAA AGAAATTAAT ACTAATATTA ATGAAAATAT TAAGAATAAT
TTCAAACCTC TTCATGATTC TAATTTTAAT AATAAAGAAG AATATTTAGA TGCAAGTTTT
GATGATGATT TAGATGAAAA TTTCAATGAT GAATCTTATC ATAATGAAGA TATTGATAAT
TTTAAACATT CTAATACCAA AAAAAAGATT TTAATAAGCA TTTTCACCTT AGTAGCTTTT
GTAATAATAG GTACTTCTAT TTATTTTTTA AGATCACCTT TATTATATAA ATACTATTAT
AACTCTGCAC TTAAATCTTC ATCAGTTACT GAAAAATTAT CTTATTATAA CAGTGCTTTA
AAATACTCTA AAAATGATGA TTTATTAAAT TCTATTTATA CAACTTTAAA GTCTGACTCT
GATTTTGTTG ATAATTCTTC AATATTAACA AACTTAAATA CATCTGAAAA AGATAATTTA
ATGTCAAAAT TATATGTAAA TAAAGCTACT GTAGATTTTA AAAATAAAAA TTACACTGAC
TGTGATTCTG ATTTAGATTT AGCTACAAAG TATGGATATA ACAAAGAAAA CTTTTCACAA
TATGATGATT TACAAAAAAA GCTTAATGAA AGTAAAAATT CTTCAAGTAA TGATAAAGTT
GATAACATAT ATAGTTTCAC AAATGAAAAC CCATCAAAAT TTTCTGGAAA CATATATGAT
TATCCTTATG ACTTTATAAT GCCATACAGT AATTCTTCTT ATTTATCAGC ATCAGATCTT
TCTAAATATA ATAAAAGTAC TCTTGCTTTA ATGAGAAATG AAATATACGC ACGTCATGGA
TATGTATTTA ATACTAATCC ATTTAAGGCA TATTTTAATT CAAAATCATG GTATCATCCT
GATTCATCCT TTAAAGGTGA TGACAGTGAA TTAAATGATT ATGAAGTAAA AAATGTTCAA
ACTATAAAAT CAGTTGAAAA CTCCAAATAA
 
Protein sequence
MKFCTKCGNK LSDSMKFCNK CGAKVKSVDK DTKNNSDTED TKDKKDIPNS KNNIDKTIIL 
DAPKIKKEIN TNINENIKNN FKPLHDSNFN NKEEYLDASF DDDLDENFND ESYHNEDIDN
FKHSNTKKKI LISIFTLVAF VIIGTSIYFL RSPLLYKYYY NSALKSSSVT EKLSYYNSAL
KYSKNDDLLN SIYTTLKSDS DFVDNSSILT NLNTSEKDNL MSKLYVNKAT VDFKNKNYTD
CDSDLDLATK YGYNKENFSQ YDDLQKKLNE SKNSSSNDKV DNIYSFTNEN PSKFSGNIYD
YPYDFIMPYS NSSYLSASDL SKYNKSTLAL MRNEIYARHG YVFNTNPFKA YFNSKSWYHP
DSSFKGDDSE LNDYEVKNVQ TIKSVENSK