Gene CPF_0100 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_0100 
Symbol 
ID4202302 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp121034 
End bp121474 
Gene Length441 bp 
Protein Length146 aa 
Translation table11 
GC content27% 
IMG OID638080981 
Producthypothetical protein 
Protein accessionYP_694564 
Protein GI110798663 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000653805 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTGTTTT ATGGAGTGAT TTCAGTGGAG TACAAAAAAG AGCAATTCAA TGAAAAGGTT 
TTAACTAATC ATATTACTAA GGAACAATGG ATTGATATTT TGAAAAATAG TAATTTAATT
GGATTAAGAG ATATGAAAAT ATTGCTTAAT TTATATGGTA GCAATGGACA GCCCCTTAAG
ACTTCTTTAA TAGGAGAGCA TTTAGAATTT GGAGATATTA GTACTAGAAT TCAAAAGATG
TGTAAAAGAA TAGAAGAAGA ATTAGGAATA GGTTTAGATG AAAAAAGCGA AATAGGAAGT
TGGAAATATA AATTTAGACA TTGGTTTATT ATGCTAAATG GATCAAAGAT ATATGATGAG
AAGGAAGAAA AAAATTATTT CACTTGGACA TTAAAAAAGG AACTTAAAGA AGCTATAGAT
TCTTTATTAG GAAAAGAATA G
 
Protein sequence
MLFYGVISVE YKKEQFNEKV LTNHITKEQW IDILKNSNLI GLRDMKILLN LYGSNGQPLK 
TSLIGEHLEF GDISTRIQKM CKRIEEELGI GLDEKSEIGS WKYKFRHWFI MLNGSKIYDE
KEEKNYFTWT LKKELKEAID SLLGKE