| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_0089 |
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| Symbol | |
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| ID | 4203284 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens ATCC 13124 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008261 |
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| Strand | + |
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| Start bp | 106517 |
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| End bp | 107275 |
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| Gene Length | 759 bp |
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| Protein Length | 252 aa |
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| Translation table | 11 |
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| GC content | 31% |
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| IMG OID | 638080970 |
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| Product | formate/nitrite transporter family protein |
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| Protein accession | YP_694553 |
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| Protein GI | 110801109 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG2116] Formate/nitrite family of transporters |
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| TIGRFAM ID | [TIGR00790] formate/nitrite transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCAAAAAA AAGATATAAA TTTAATTTCA GACATGGCAG TTAATAAGTT TAAGTTTGCA
GATAGAGCTC CTATAAAGTA TTTTTTTAGA GCTATAGTTG CAGGATTTTT CCTAGTAGTA
GCCATAATTC TTTCATATAC TACTGGAGCG GTTTTAAATA ATTCATATCC AGAGATAGCA
AGAATAATGG TAGCTGCAAC CTTCTCTTTA GCATTAGGGC TTATTGCTTT TATTGGAGGA
GAGCTCTTTA CAGGAAATAA CTTAGTCATG TCAATTGGGA TATACAACAA TGAGTGTACC
TTAACTATGG CATTAAAAGT TTGGTTTATG AGTTATTTAG GAAATTTTAT AGGATCTATA
TTATTAGGGT TTTTATTTGT TAAGAGTGGA GCATCTATGG ATTTAATTAA GGATTATGCT
AAAGGTATAG TTGATATAAA ACTTAATTTA CCTGCTCTTG AACTCTTTTT AAGAGGTATG
CTTTGTAACT TCATGGTTTG TATAGCATTT CTAAGCACAA TAAAAATGAA ATCTGAAACA
GGCAAATTAA TAATTATGTT CTGGTGTATA TTTGCATTTG TTATCGCTGG TTTTGAACAC
AGCATTGCTA ATATGGGAAT ATTCTCTATA ACTTATTTCG CCTCAGGTGA TGTAAGTTTA
CCACTTGTTT TCCGTAATTT ATTTTGGGTT ACATTGGGAA ATATGGTAGG AGGGGGAGTG
TTATTAGCAT TGCCACTTAA ATTTATGAGC ATGGAATAA
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| Protein sequence | MQKKDINLIS DMAVNKFKFA DRAPIKYFFR AIVAGFFLVV AIILSYTTGA VLNNSYPEIA
RIMVAATFSL ALGLIAFIGG ELFTGNNLVM SIGIYNNECT LTMALKVWFM SYLGNFIGSI
LLGFLFVKSG ASMDLIKDYA KGIVDIKLNL PALELFLRGM LCNFMVCIAF LSTIKMKSET
GKLIIMFWCI FAFVIAGFEH SIANMGIFSI TYFASGDVSL PLVFRNLFWV TLGNMVGGGV
LLALPLKFMS ME
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