Gene CPF_0077 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_0077 
Symbol 
ID4201932 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp92386 
End bp92928 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content38% 
IMG OID638080958 
Productrubredoxin/rubrerythrin 
Protein accessionYP_694541 
Protein GI110801331 
COG category[C] Energy production and conversion 
COG ID[COG1592] Rubrerythrin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.165154 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAT TTGTTTGTAC AGTATGTGGA TATGTTTATG AAGGAGAAAA AGCACCAGAA 
AAATGCCCAG TATGTGGAGT TGGAGCTGAC AAATTCGTAG AACAAGGAGA AGACTTAGCA
TTTGCAGATG AGCACAGAAT CGGAGTTGCT AAAGGTGTAG ATGAAAGAAT AATCGAAGGA
TTACAAGCTA ACTTTGTAGG AGAATGTACA GAAGTAGGAA TGTACTTAGC TATGTCAAGA
CAAGCTGATA GAGAAGGATT CCCAGAAGTT GCAGAAGCTT ACCAAAGAAT AGCTTTCGAA
GAAGCAGAAC ACGCTGCTAA ATTCGCAGAA ATGTTAGGAG AAGTTGTAGA AGCTGATACA
AAAGCTAACT TACAAGCAAG AGTAAATGCA GAGCATGGAG CTTGCCAAGG TAAAAAAGAT
TTAGCTACTT TAGCTAAACA ATTAAACTTA GATGCAATCC ACGACACAGT TCACGAAATG
TGTAAAGACG AAGCTAGACA CGGAAAAGCT TTCGCTGGAT TATTAAACAG ATACTTTAAA
TAA
 
Protein sequence
MKKFVCTVCG YVYEGEKAPE KCPVCGVGAD KFVEQGEDLA FADEHRIGVA KGVDERIIEG 
LQANFVGECT EVGMYLAMSR QADREGFPEV AEAYQRIAFE EAEHAAKFAE MLGEVVEADT
KANLQARVNA EHGACQGKKD LATLAKQLNL DAIHDTVHEM CKDEARHGKA FAGLLNRYFK