Gene CPF_0053 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_0053 
Symbol 
ID4201814 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp59538 
End bp59876 
Gene Length339 bp 
Protein Length112 aa 
Translation table11 
GC content38% 
IMG OID638080928 
Producthypothetical protein 
Protein accessionYP_694519 
Protein GI110800382 
COG category[S] Function unknown 
COG ID[COG0718] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR00103] DNA-binding protein, YbaB/EbfC family 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAAGAG GTGGATTTCC AGGCGGAATG GGAAACATGA ATAATTTAAT GAAGCAAGCA 
CAAATGCTTC AAAAACAAAT GCAATCAATG CAAGAGGAAA TCGAAGCATC AGAATTCGAA
GGCTCAGCTG GCGGCGGTGC AGTTGTTGCA AAAGTTAACG GAAAGAAAGA ATTAATCGCA
CTTAATATAA AGCCAGAAGT TGTAGATCCA GATGATGTTG AAATGTTAGA AGATCTAGTT
TTCTCAGCTG TTAAGCAAGC TTTAGAAAAA GCTTCTGAAG AAACTTCAGA AAAGATGGGT
AAATTAACTG GTGGAATGGG AATGCCAGGA TTATTCTAA
 
Protein sequence
MARGGFPGGM GNMNNLMKQA QMLQKQMQSM QEEIEASEFE GSAGGGAVVA KVNGKKELIA 
LNIKPEVVDP DDVEMLEDLV FSAVKQALEK ASEETSEKMG KLTGGMGMPG LF