Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_0052 |
Symbol | dnaX |
ID | 4202845 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | + |
Start bp | 57783 |
End bp | 59426 |
Gene Length | 1644 bp |
Protein Length | 547 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 638080927 |
Product | DNA polymerase III subunits gamma and tau |
Protein accession | YP_694518 |
Protein GI | 110799164 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2812] DNA polymerase III, gamma/tau subunits |
TIGRFAM ID | [TIGR02397] DNA polymerase III, subunit gamma and tau |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGGCATATA AAGCTTTGTA TAGAGAGTGG AGACCACAAA CCTTTAATGA TGTTGTAGGT CAAGAGCATA TAACCACTAC ATTAAAAAAT CAGATAATAA ATGAAAGAAC AGCTCATGCA TATTTATTTT GTGGTACTAG AGGAACTGGT AAAACCTCTA CAGCTAAGGT AATGGCTAAG GCTTTAAACT GTCTAGATTT AAAAGACGGA GAGCCTTGTA ATCAGTGTGA GATGTGTAAA AAAATAAATG AAGGATTAGC AATAGATATA ACTGAACTTG ATGCAGCTTC AAACAATGGT GTAGATAACA TAAGGGATAT AATTGATGAT GTTCAATATC CACCCCAAGA AGCTAGGTTT AAAGTTTACA TAATGGATGA GGTTCACATG CTTTCTATTG GGGCAGTTAA TGCTTTTTTA AAGACTTTAG AAGAGCCACC AAAGAATGTG GTCTTTATTT TGGCTACAAC AGATCCTCAA AAATTACCTA TAACTATATT ATCAAGATGT CAAAGGTTTG ACTTCAAAAG GATTAGTAGA AAAGATATAA CAGGAAGACT AAGAAAAATA GTTACTGAGC AAGGTATATT CTGTGATGAT AAAAGCTTAG ATCTTGTTGC AAGAGTATCT GATGGAGCTA TGAGAGACTC TTTAAGTATA TTAGATCAAG CTATTTCTAT AGGGGATGGT AAGGTAGATT ATGATGAATT AGTTTCTATG TTAGGTCTTG TAACTAATGA TAATTTATTT AAAATAGTAG ATTCTATAAT AAAAAGAGAT ATAGAAAGTG CTATGGAAAT AATAGAAGAA TTAGTTCTTA CAGGAAAGGA TATGACTCTT TTCATAAAGG ACTTAATAGT TCATTATAGA AACTTGCTTA TGATAAAGGT AACTTCAAAT CCAGAGGAAG TTTTAGATAC TGCTGAGGAA AATATAGAAA AACTTAAAGT GCAAGGTGCT AAGTTAAAGG TTGAAGAAAT CATGAGATGC ATAAGAATTG TGCAAGAATG TGATGAAGAG GCTAAACTTA GTAAACAGGC TAGAGTTTAT TTAGAGCTTG CAGTAATAAA AATGTGCAAA ATAGAGTATG ATACATCTAA GGAAGTTATG CTAGCAAGAA TAAATAAGTT AGAACAAGCA ATAAGAAGTG GAAATATACA GGTTAATACT AATTTAGAAG AGGTTAAATC ACAAGTTTCA AATGAAGCTT CAAATAATAA AACTTTAAAT AATAAACAAC AGAATGTTAC TCAAAGTTCA AATAATTATG AGGTAGTAAA TGAAAATTCA ACCCTAACAC CAGAGTATTT AAGAAAGGTT TGGAAAGATA TACTTGAAAC CTTTAAGAGT AGAGGAAAGT ATATGGTTTA TATAGCCTTA GCAAAGGGTA TAAGCAAAGT TTCTTGTAAT AAAGGTGTTG TTGAATTTAG ATATACTTAT GAATATAGAC ATAATAAAGA AAGACTTGAA AAACATGATT TCTCTAAAAT AGTAAATGAT ATATTTTCAG AAGTTTTAAA GGAACCTGTA AGAGTTGTAT ATAGTGTAGA ACAAGGAACA GAAGAGGAAA AAGCTGAGGA AGCTGATTTA GAAGCTAGAC TTTCAGGCAT TATGGGTGAT GGTCTAGAAA TAGTTGAAGA ATAG
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Protein sequence | MAYKALYREW RPQTFNDVVG QEHITTTLKN QIINERTAHA YLFCGTRGTG KTSTAKVMAK ALNCLDLKDG EPCNQCEMCK KINEGLAIDI TELDAASNNG VDNIRDIIDD VQYPPQEARF KVYIMDEVHM LSIGAVNAFL KTLEEPPKNV VFILATTDPQ KLPITILSRC QRFDFKRISR KDITGRLRKI VTEQGIFCDD KSLDLVARVS DGAMRDSLSI LDQAISIGDG KVDYDELVSM LGLVTNDNLF KIVDSIIKRD IESAMEIIEE LVLTGKDMTL FIKDLIVHYR NLLMIKVTSN PEEVLDTAEE NIEKLKVQGA KLKVEEIMRC IRIVQECDEE AKLSKQARVY LELAVIKMCK IEYDTSKEVM LARINKLEQA IRSGNIQVNT NLEEVKSQVS NEASNNKTLN NKQQNVTQSS NNYEVVNENS TLTPEYLRKV WKDILETFKS RGKYMVYIAL AKGISKVSCN KGVVEFRYTY EYRHNKERLE KHDFSKIVND IFSEVLKEPV RVVYSVEQGT EEEKAEEADL EARLSGIMGD GLEIVEE
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