Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_0047 |
Symbol | lgt |
ID | 4201323 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | + |
Start bp | 53171 |
End bp | 53959 |
Gene Length | 789 bp |
Protein Length | 262 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 638080922 |
Product | prolipoprotein diacylglyceryl transferase |
Protein accession | YP_694514 |
Protein GI | 110798717 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0682] Prolipoprotein diacylglyceryltransferase |
TIGRFAM ID | [TIGR00544] prolipoprotein diacylglyceryl transferase |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.000638304 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATCCAG TAGCATTTTC AATTGGTAGT TTTGAAGTAA GGTGGTATGG CATAATCATA GCATTAGGAA TTTTAATTGC AATGACCTTG GTAAGTATTA ACGCAAAGAA AAAGAATTTA AACTTTGATG TTATCTTAGA TTTATTTTTA TGGTGCTTTC CTTTTGCTAT TATAGGGGCT AGAGCATATT ACGTGCTTTT TGAGCTTGAA AATTATCATA GCTTTTGGGA TATGATAAAC ATAAGACAAG GTGGATTAGC GATTCATGGA GGAATAATAG GAGCTTTCTT AACTGCATTT ATTTATTGTA AGGTTAAAAA AGTAGATTTT TTAGCCTATG CAGATATTGT GGCTCCAGCT TTTATATTAG CTCAAGGAAT AGGTAGATGG GGGAATTTTT TTAACCAAGA GGCTCATGGT GGACAAGTAA CTAGTGAGTT TATTAGTAAA TTTCCTGAGT TTATTCAAAG GGGTATGTAC ATAAATGGAG CATATTATCA TCCTACATTC TTATATGAAA GTATATGGGA TATATTTGTG GCCATTTTAT TGATGATAAT TTTATATAAT ATTACAGATA GATATAAGGG AGTAGTTATT TCTGCTTATA TATCTTTATA TTCTCTAGGA AGATTCTTTA TTGAAGGGCT AAGAACAGAT AGTTTATATT TTATGAATAT TAGAGTTGCT CAATTAGTTA GCTTACTAGG AATTATTATT GGAATTGTGG CAATAATAAT TATTGTTTCA AGAGGAAAGA AAAAGAGAAA AGGTATATTT ATAAATTAG
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Protein sequence | MNPVAFSIGS FEVRWYGIII ALGILIAMTL VSINAKKKNL NFDVILDLFL WCFPFAIIGA RAYYVLFELE NYHSFWDMIN IRQGGLAIHG GIIGAFLTAF IYCKVKKVDF LAYADIVAPA FILAQGIGRW GNFFNQEAHG GQVTSEFISK FPEFIQRGMY INGAYYHPTF LYESIWDIFV AILLMIILYN ITDRYKGVVI SAYISLYSLG RFFIEGLRTD SLYFMNIRVA QLVSLLGIII GIVAIIIIVS RGKKKRKGIF IN
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