Gene CPF_0044 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_0044 
Symbol 
ID4201205 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand+ 
Start bp50693 
End bp51277 
Gene Length585 bp 
Protein Length194 aa 
Translation table11 
GC content26% 
IMG OID638080919 
Producthypothetical protein 
Protein accessionYP_694511 
Protein GI110799721 
COG category[R] General function prediction only 
COG ID[COG0523] Putative GTPases (G3E family) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAAAAAT GTTCAGTTGA TTTAATAACA GGTTTTTTAT CATCAGGAAA AACATCCTTC 
ATAAATCACA TTTTAGATGA TTTTTCTAAG GAGGAGGTTT TAGTAATACA ATGTGAGCGT 
GGGCAGGAAG AATTAATAAA TTGTAGGAAA AATATTAATG TAAAAAAGTT TTATAGCATG 
GATGAATTAA AGGAAGAGGA TTTAATAAGA AGCATAAAGT TTTATGCGCC TAAGAGAGTT 
TTTATTGAGT GTAATGGGGT TAGTGAAACT AAAAAGTTTA TAGATAAAGT TACAAATAGT 
AAGCTTAAGG AATATTTAAA GATTGGGATT ATAGTTAATT TAATTGATAT GACAACTTTT 
AATATGTTTT TAAAGAACAT ACCTTCAATG ATAATACCGA ACATATCACT AAGCAATCTT 
ATTGTTTTAA ATAAATGTAA TGAAATAAGT GAAAATGCTT TAAAAGAATA TAAAGATATG 
ATAGAAAGAT TTAATCATAA TGCCCATATA GTTAATTGCA TAGGTAAGGA AGGAACTAAT 
ATGAACTTTA ACAAAGAAAG ACTTATAAAC AGGATGATGG GATAA
 
Protein sequence
MKKCSVDLIT GFLSSGKTSF INHILDDFSK EEVLVIQCER GQEELINCRK NINVKKFYSM 
DELKEEDLIR SIKFYAPKRV FIECNGVSET KKFIDKVTNS KLKEYLKIGI IVNLIDMTTF 
NMFLKNIPSM IIPNISLSNL IVLNKCNEIS ENALKEYKDM IERFNHNAHI VNCIGKEGTN 
MNFNKERLIN RMMG