Gene CPF_0043 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_0043 
Symbol 
ID4201104 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp49747 
End bp50673 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content27% 
IMG OID638080918 
ProductCobW/P47K family protein 
Protein accessionYP_694510 
Protein GI110798981 
COG category[R] General function prediction only 
COG ID[COG0523] Putative GTPases (G3E family) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.845125 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGTAG ATATAATTTC AGGATTCCTA GGAGCTGGCA AAACTACTTT AATAAAAAAG 
CTTTTAGATA CCTTAGTAAA GGATGAAAAG GTAGCTATTG TGGAAAATGA ATATGGAGAA
GTTGGAATTG ATGGAGATTT ACTTAAAGAT AGAAGAATTG AAGTAAAAGA AATTAATTCT
GGGTGTATAT GTTGCACCAT AAAGGGAGAC TTTAAACAAA ATATTTTAGA CATAATATCA
AATTACAGAC CAGATAGAAT CATAATTGAA CCTTCAGGAG TAGCTAATTT TTCTCAAGTT
CTTGAATCTA TAAAAGAAGC TCATATAGAG GGCTTAAGAA TAAATATGAA AATAACCATG
GTTGATGCTC AAAATGTTCA TATGTATATG AAAAACTTTG GAGATTTTTA TAGAAGTCAA
TTAGTAAATG CAAACACAAT AATATTAACT AGAGTAGAAA AACTTTCTGA TAAGGAAATT
ACTCATGTTT GTAATGAAAT AAAAACAATA AACAATAAGG CTAACATTAT AACTACTGAG
TTAAGTAAGT TAAGCCCAGA AAGAATAATT CAAGTTTCAG AGAAAAAAGT TGAAAATTTA
ATAGAGAATA TAAATATTAA GAAGCCTAAA AGAATAGGTT TAAGAAGAGT TTCTGCACCT
GAGTTTTTTG AAAATTGGGG AGTGGAGACA CCAAAAACCT TTGAATATTC TGAGTTAGTA
AAAATTTTAA ATGAATTTCA AAATAACAAG CATGGTGAGG TTTTAAGGGC AAAGGGAATA
ATAAAATCTA AAGATAATAA GTGGTTTAAA TTTGATTTTG TACCAAATGA TATTTCTATT
GTTAATTATA AAAGTGATTA TACAGGTAGA GTTTGTGTTA TAGGAAGAAA TTTAAATAAA
GATAGTATAG ATAAGTTATT TTCTTAA
 
Protein sequence
MKVDIISGFL GAGKTTLIKK LLDTLVKDEK VAIVENEYGE VGIDGDLLKD RRIEVKEINS 
GCICCTIKGD FKQNILDIIS NYRPDRIIIE PSGVANFSQV LESIKEAHIE GLRINMKITM
VDAQNVHMYM KNFGDFYRSQ LVNANTIILT RVEKLSDKEI THVCNEIKTI NNKANIITTE
LSKLSPERII QVSEKKVENL IENINIKKPK RIGLRRVSAP EFFENWGVET PKTFEYSELV
KILNEFQNNK HGEVLRAKGI IKSKDNKWFK FDFVPNDISI VNYKSDYTGR VCVIGRNLNK
DSIDKLFS