Gene CPF_0040 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_0040 
Symbol 
ID4202675 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp45836 
End bp46447 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content36% 
IMG OID638080915 
Producthypothetical protein 
Protein accessionYP_694507 
Protein GI110799578 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTAACAA TAATAAACAT AGATGTGGTT CATGTAACAG AGGCGCAGAG CGTAAAAATA 
GAAATAGAAA CAGAAGAGGA TATACCAATA GTTTCAGATG TTTTTATAAC AGTAGATGAT
GCTAAAAAAT GGGCACAAGG AAAAGGAGCC ACTAAGGAAT TTGTTGAACT TGCTGATTTA
TATTGGGAAT ATTCAGATGA ACATGGGGAT GTTAATCCAG CTTTAGCGTA TGTACAAGCA
GCTAAGGAAA CTGCCTATGG TAATTTTGGA GGAGTATTAG ATGCTTCATA TCATAATCCA
TGTGGGTTAA AAACAAATAA GGGTGGGAGC GATAAAGACC CTAAAGCTCA TATGAAATTT
AAAAGTTGGA ATGAAGGAGT AAAGGCTCAT TTGGATCACT TAGCATTATA TGCAGGGGCA
GAAGGATATC CAAAGGCTGA AACAAAGGAC CCTAGACACT TTGCTTCAAT ATTTGGGAAA
GCTAATTCAG TAATTGATTT AAGCAAAAAT TGGGCACCAA GTCCTACCTA TGGAGAAGAA
ATTCTTGGAA TGTACAATGA GATGATGGAA GGGGCAGGAA ATAAAGACAT AGAGGTAATG
AATATATTTT AA
 
Protein sequence
MLTIINIDVV HVTEAQSVKI EIETEEDIPI VSDVFITVDD AKKWAQGKGA TKEFVELADL 
YWEYSDEHGD VNPALAYVQA AKETAYGNFG GVLDASYHNP CGLKTNKGGS DKDPKAHMKF
KSWNEGVKAH LDHLALYAGA EGYPKAETKD PRHFASIFGK ANSVIDLSKN WAPSPTYGEE
ILGMYNEMME GAGNKDIEVM NIF