Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_0036 |
Symbol | |
ID | 4203577 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | + |
Start bp | 42977 |
End bp | 44242 |
Gene Length | 1266 bp |
Protein Length | 421 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 638080911 |
Product | putative transporter |
Protein accession | YP_694503 |
Protein GI | 110800603 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG4536] Putative Mg2+ and Co2+ transporter CorB |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGGACCCAT ATACGTTTCA AATTGTGCTT CTTATTATCT TGATAATTTT ATCAGGATTT TTTTCAGCCT CAGAAACAGC TTTAATGGCT TTAAGCAGAA TAAGAGTAAG GCATATGGTT GATGAAGAGA TAAAAGGAGC TAAGTTATTA GAAAAATTAT TAGAAGACCC TAATAAATTA TTAGGTGGAA TCTTAATAGG AAATAATATA GTTAATATAG GTGCATCATC ATTAGCATCA ACACTTGCTT TTAGAATATT TGGTGATGGT GGAGTTGCCT TAGCTACTGG AGTTATGACA ATACTAGTAT TAATCTTTGG AGAAATAACA CCTAAATCCT TAGCTAAGCA AAATGCAGAG AAGGTTTCTT TAGCCGTAGC TCCTATAATA AATATAGTGG TTACAATTTT CAAACCTCTT GTTTGGTTAT TTTCTTCAGT ATCATCCCTA ATAGTAAGAT TATTAGGTGG AGATTTAAAT AAAAGTGAGC CATTTATAAC AGAAGAAGAG TTAAAAACAA TGGTTGATGT AAGTGAAGAA GAGGGAGTTC TTGAAGTTGA AGAAAAAGAA ATGATATTCA ATGTTTTTGA ATTTGGAGAT CTTCAAGTAA AAGATATAAT GGTTCAAAGG GTAAATGTCA TTGCAGTAAA TGTTACAGCT ACCTACGAAG AAGTATTAAA AGTAATAAAA GAACAACAAT TTTCAAGAAT ACCAGTTTAT AATGAATCAA TAGATGATAT TGTTGGAATT TTAAATGTTA AAGATTTAAT TCTTTTAGAT AGTGATGAGG AAAATTTCAA TGTAACAGAA TACATGAGAG AACCTTTTAG AACCTTTGAA TTTAAAAAGA TAACAGAACT ATTTGCAGAG ATGAAAACAA CTAGAAATCA CATAGCAGTA GTACTAGATG AATATGGCGG AACAGTTGGT ATTGTTACTA TTGAGGACTT AATAGAAGAA ATCGTAGGAG ATATTGAAGA TGAATACGAT GAGAGAGATA AAGATATAGA AGTTATCAAA GAAAATGAGT TCGTAGTAGA TGGTAGCACA AGACTTTCTG ACTTAAGTGA TATGATAGGA TTTGAAATAG AATCTGAGGA ATTTGATTCT ATTGGAGGAT ATGTAATAGG TTATTTAGGA AGAATGCCTA AGGTTGGAGA GGAAATTAAA ACTAATGACT TTAGAGTTAT TGTTGAAGAA TTAGATAGAA ATAGGGTAAA AAAGGTTAGA GTTTACACAT ATAAACGAGA AAAAGAGGAG AGTTAA
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Protein sequence | MDPYTFQIVL LIILIILSGF FSASETALMA LSRIRVRHMV DEEIKGAKLL EKLLEDPNKL LGGILIGNNI VNIGASSLAS TLAFRIFGDG GVALATGVMT ILVLIFGEIT PKSLAKQNAE KVSLAVAPII NIVVTIFKPL VWLFSSVSSL IVRLLGGDLN KSEPFITEEE LKTMVDVSEE EGVLEVEEKE MIFNVFEFGD LQVKDIMVQR VNVIAVNVTA TYEEVLKVIK EQQFSRIPVY NESIDDIVGI LNVKDLILLD SDEENFNVTE YMREPFRTFE FKKITELFAE MKTTRNHIAV VLDEYGGTVG IVTIEDLIEE IVGDIEDEYD ERDKDIEVIK ENEFVVDGST RLSDLSDMIG FEIESEEFDS IGGYVIGYLG RMPKVGEEIK TNDFRVIVEE LDRNRVKKVR VYTYKREKEE S
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