Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_0029 |
Symbol | pepT |
ID | 4203802 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | + |
Start bp | 37194 |
End bp | 38414 |
Gene Length | 1221 bp |
Protein Length | 406 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 638080904 |
Product | peptidase T |
Protein accession | YP_694498 |
Protein GI | 110800422 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2195] Di- and tripeptidases |
TIGRFAM ID | [TIGR01882] peptidase T |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGAAAG TTCATGAAAG GTTTTTAGAA TATGTAAAAG TAGATACTAA ATCAGATGAG ACAACAAGGG TTACTCCTAG TACAAAAGGT CAATTAGAAT TAGGAAAAAT CCTTGCAGAG GAATTAAAGG AAATCGGAGT AGATGAAGTA AGAATAAGTG ATAAAGGATA TGTATATGCT TGTTTAAAGA GTAATTGTGA TAAGGATATT CCGAAAATAG GATTTATTTC ACATATGGAT ACTGCACCAG ATATGAGTGG AAAAAATGTT AATCCTAAAA TTGTTGAAAA TTATGATGGT AAAGATATTG AACTTGGAAA TGGATATACA TTATCACCAA GTTTTTCACC AGAACTTCCA ATGTATAAAG GTCAAACTTT AATAACTACT GATGGAACTA CTCTTTTAGG CGCTGATGAT AAGGCAGGGG TAGCAGAAAT AGTAACAGCT ATTGAATATT TAATAAATAA TCCAGAAATA AAACATGGTG ATATTAAAAT AGGATTTACT CCAGATGAAG AAATTGGAGA AGGAGCAGAT CACTTTGATG TTGAAGGCTT TGGAGCAGAT TTTGCTTACA CATTAGATGG TGGAAGAATA GGTGAATTAG AATATGAAAA CTTTAATGCT GCAAGTGCTA AGGTTGAAAT AATAGGTAAA AATGTTCACC CAGGAAGTGC TAAAGGAAAA ATGATTAACT CTATTTTAGT TGCTCATGAA TTTGTTTCTA TGCTTCCTTT AGATGAAGTT CCAGAAAAAA CAGAAGGATA TGAAGGTTTC TCATTCTTAT TAGATATACA AGGTGAAGTA GAAAAAACTT CATTATCATT TATAATAAGA GATTTTGATA AAGAAGGCTT TAAAAATAGA AAAGAAAGAT TTAATGAAAT AGCTAAAGAG TTAAATAAAA AGTATGGAGA AGGTACTGTT ACAGTAACTT TAAAAGACCA ATACATGAAC ATGAAGGAAA TGATAGAACC TAGAATGCAT ATTGTAGAAA CTGCTGAAAA AGCAATGAAA CAATGTGGAA TTGAGCCAAT CAAAAATCCT ATAAGAGGAG GTACTGATGG GGCAAGATTA TCATTTATGG GACTACCAAC ACCAAATCTA TTTACTGGCG GAGAAAACTT CCATGGAAGA TATGAATATA TATCAATAAA TTCAATGGAA AAAGCTGTTG AAGTAATACT AAACATAATA AAAATTTATG CTGAAAAATA A
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Protein sequence | MKKVHERFLE YVKVDTKSDE TTRVTPSTKG QLELGKILAE ELKEIGVDEV RISDKGYVYA CLKSNCDKDI PKIGFISHMD TAPDMSGKNV NPKIVENYDG KDIELGNGYT LSPSFSPELP MYKGQTLITT DGTTLLGADD KAGVAEIVTA IEYLINNPEI KHGDIKIGFT PDEEIGEGAD HFDVEGFGAD FAYTLDGGRI GELEYENFNA ASAKVEIIGK NVHPGSAKGK MINSILVAHE FVSMLPLDEV PEKTEGYEGF SFLLDIQGEV EKTSLSFIIR DFDKEGFKNR KERFNEIAKE LNKKYGEGTV TVTLKDQYMN MKEMIEPRMH IVETAEKAMK QCGIEPIKNP IRGGTDGARL SFMGLPTPNL FTGGENFHGR YEYISINSME KAVEVILNII KIYAEK
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