Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_0001 |
Symbol | dnaA |
ID | 4202657 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | + |
Start bp | 411 |
End bp | 1784 |
Gene Length | 1374 bp |
Protein Length | 457 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 638080873 |
Product | chromosomal replication initiation protein |
Protein accession | YP_694476 |
Protein GI | 110799791 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0593] ATPase involved in DNA replication initiation |
TIGRFAM ID | [TIGR00362] chromosomal replication initiator protein DnaA |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.000458864 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATGCCC AACTAAATAA TCTCTGGGAA CAAGCATTGA ACATAATAAA AGGAGAAATT TCTGAAATAA GCTTTAACAC TTGGATTAAA AGCTGTACTC CTATATCAAT TTCAGATAAT ATATTAAAAC TTTCTGTTCC TAATGAATTC ACTAAAGGGA TTTTAGATAC AAGATATAAA GACTTATTAA TTCAAGCTTT AAAGATAGTT ACATCTAGAA AGTTTAAAAT AGAGTTCTAT CTTGAGTCTG ATTTAGAAGA AGAAAAAGAA AATGAGGAAA AGCAGAAAGA AGAGAAGAAA GAGAATACAA ATGATGTCGA TGGATCTATA GTTGTAAGTG ATGAAATGTC AGCTACATTA AATCCTAAAT ATACTTTCCA ATCCTTTGTA ATAGGTAATA GTAACCGCTT TGCTCATGCA GCATCTTTAG CTGTTGCAGA ATCACCAGCA AAAGCTTATA ACCCATTATT TATCTATGGA GGAGTAGGAC TTGGAAAAAC TCACTTAATG CATGCAATAG GACATTATAT TCTTCAAGAA AATCCTAAAG CAAAAGTAGT TTATGTATCA TCTGAAAAAT TCACTAATGA ACTTATTAAT GCTATTAAAG ATGATAAGAA TGAAGAGTTT AGAAACAAAT ATAGAAAAGT CGATGTTTTA TTAATAGATG ATATTCAATT CATAGCAGGT AAAGAACGTA CTCAAGAAGA GTTCTTCCAT ACCTTTAATG CTCTACATGA AGAGAATAAA CAAATTATAC TATCATCAGA TAGACCGCCT AAGGAAATTC CTACATTAGA AGACAGGTTA AGATCTAGAT TTGAATGGGG TTTAATAGCA GATATTCAAC CACCTGATTT CGAAACTAGA ATGGCAATAC TAAAGAAAAA AGCTGATGTT GAAGGCTTAA ATGTACCAAA TGAAGTTATG GTATATATAG CTACTAAAAT CAAATCAAAT ATAAGAGAAT TAGAAGGCGC ACTTATAAGA ATAATAGCTT ATTCCTCTCT AACTAATAGG GATGTAAGCG TTGATTTAGC TTCAGAAGCA CTTAAAGATA TAATATCTAA TAAAGAAAGT GCTCCAGTTA CAGTAAAAAC TATTCAAGAA TCCGTAGCAA ATTATTATAA TTTAAGAATA GAGGATTTAA AATCTCAAAG AAGAACTAGA AATATAGCTT ATCCTCGTCA AATTGCTATG TATTTAAGTA GAAAACTTAC AGATATGTCT TTACCTAAAA TAGGTGAAGA ATTTGGTGGA AGAGATCATA CTACAGTAAT TCATGCTTAT GAAAAAATTT CTGAAAATTT AAAGACTGAT GAAGGTCTAC AAAGCATGAT TAATGACATT ACTAAAAAGC TTACTCAAAA GTAA
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Protein sequence | MDAQLNNLWE QALNIIKGEI SEISFNTWIK SCTPISISDN ILKLSVPNEF TKGILDTRYK DLLIQALKIV TSRKFKIEFY LESDLEEEKE NEEKQKEEKK ENTNDVDGSI VVSDEMSATL NPKYTFQSFV IGNSNRFAHA ASLAVAESPA KAYNPLFIYG GVGLGKTHLM HAIGHYILQE NPKAKVVYVS SEKFTNELIN AIKDDKNEEF RNKYRKVDVL LIDDIQFIAG KERTQEEFFH TFNALHEENK QIILSSDRPP KEIPTLEDRL RSRFEWGLIA DIQPPDFETR MAILKKKADV EGLNVPNEVM VYIATKIKSN IRELEGALIR IIAYSSLTNR DVSVDLASEA LKDIISNKES APVTVKTIQE SVANYYNLRI EDLKSQRRTR NIAYPRQIAM YLSRKLTDMS LPKIGEEFGG RDHTTVIHAY EKISENLKTD EGLQSMINDI TKKLTQK
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