Gene CHU_3840 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_3840 
SymbolhflX 
ID4183512 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp4426576 
End bp4427754 
Gene Length1179 bp 
Protein Length392 aa 
Translation table11 
GC content41% 
IMG OID638073827 
ProductGTP1/OBG family GTP-binding protein 
Protein accessionYP_680415 
Protein GI110640205 
COG category[R] General function prediction only 
COG ID[COG2262] GTPases 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain
[TIGR03156] GTP-binding protein HflX 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGCAAG AAGAGACCGG ATTTTCGACA CACAAAATTG CTGACAAGGC TATATTAATA 
GGCTTATCGC ATAGAAATCA GCCACAGGAA AAAACAATAG AATATTTAGA TGAGCTTGAT
TTTCTGGCCC GCACTGCGGG TTTGGAAGTT GTATATCGTT TTACGCAAAA ACTTGATCGT
CCGGATATAC GAACATACAT CGGGAAAGGA AAGCTTGCTG ATGTGAAATT GTATATTCAA
ACACATTCTA TCCCTGTTAT TATTTTTGAC GATGAACTAA GTCCTTCTCA ACTGCGGAAT
TTAGAAAAAG AGCTGGCTTG TAAAATCTAT GACCGCAGCT TATTGATTCT GGATATATTT
TCCTTACGTG CACAAACTGC GCAATCGCGC ACCCAGGTTG AGCTGGCGCG TTTACAATAT
TTGCTTCCTC GCTTAACCAA TATGTGGACA CACCTAGAGC GCCAACGTGG CGGTACGGGT
ACCAGAGGCG GATCGGGAGA GAAAGAAATT GAAACAGACC GCCGTATTAT CCGGGATCAG
ATTTCGTTGC TCAAAACGCG TCTTGCGAAG ATCAATAAAC AAAGTGAAAC GCAGCGCAAA
TCCAGGGATG GCATTGTACG TGTAGCATTA GTAGGTTATA CCAACGTAGG TAAGTCTACA
CTGATGCAGC GGTTGTCAAA ATCAGATGTG TTTGCAGAAA ATAAATTATT TGCAACCGTT
GATTCTACTG TACGCAAAGT TGTATTGAAT GAAATTCCGT TTTTGTTAAC CGATACGGTT
GGTTTTATCC GCAAGCTTCC TCACGGGCTG ATAGAAAGTT TTAAATCTAC GTTAGATGAA
GTGCGCGAGG CCGACATTTT ATTGCATGTC ATTGACCTGC CTCACCCTTC CTACGAAGAG
CACATGCAGG TTGTACAGTC TACCTTAGCT GAAATAAAAG CGAACGATAA AATCGTGGTT
CTTGTGTTCA ATAAAGTTGA TGTGTATCTG AAAAATATTC AGAATGACCC GGATGCGCTT
TCACTGCAGG AAATTGACAA GATGTACACG GGTAAAGAAA ACAGTAACCG GGTATTTATT
TCAGCAACCG AAAATTTAAA TATTGATAAG CTTCGTGCTG TATTAATTGA AAAAGTAACA
ACAGTACATT GTACCATCTA TCCAAATTAT CTGTTGTAA
 
Protein sequence
MMQEETGFST HKIADKAILI GLSHRNQPQE KTIEYLDELD FLARTAGLEV VYRFTQKLDR 
PDIRTYIGKG KLADVKLYIQ THSIPVIIFD DELSPSQLRN LEKELACKIY DRSLLILDIF
SLRAQTAQSR TQVELARLQY LLPRLTNMWT HLERQRGGTG TRGGSGEKEI ETDRRIIRDQ
ISLLKTRLAK INKQSETQRK SRDGIVRVAL VGYTNVGKST LMQRLSKSDV FAENKLFATV
DSTVRKVVLN EIPFLLTDTV GFIRKLPHGL IESFKSTLDE VREADILLHV IDLPHPSYEE
HMQVVQSTLA EIKANDKIVV LVFNKVDVYL KNIQNDPDAL SLQEIDKMYT GKENSNRVFI
SATENLNIDK LRAVLIEKVT TVHCTIYPNY LL