Gene CHU_3817 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_3817 
Symbol 
ID4184711 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp4405629 
End bp4406882 
Gene Length1254 bp 
Protein Length417 aa 
Translation table11 
GC content43% 
IMG OID638073803 
Producthypothetical protein 
Protein accessionYP_680392 
Protein GI110640182 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.40182 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTTGTG CGCAGGCACA ATCGCTTGCG GCAAAGGATT CTGTTATTGC TACACCAACC 
ACTTCTTCTA TTACAGCTTC AGACACAAAA CCTGCTGAAA CGAAAAAGAA AAATTGGTAT
GAAGTGATAA GTTTAAGAGG GTATGCGCAA TTTCGTTATA ACCGGTTGCT GGAAACAAAT
TCAGACCTTA AGTGTGATCA ATGTGATAAA AGTATCGGGA ACAACGGTGG CTTTTTCTTT
CGCAGAGCAC GCCTTGTATT CAGCGGAAAT ATTCACGAAC GGGTTTTTAT ATACATTCAG
ACAGACGTAG CAACAAATGC TACAGCGGGC TCTACGCTTG GGTTAAATTA CCTTCAGATC
AGAGATTTCT ACGGCGATAT TTATTTAACC AAAGACCGGA AATTACGGGC ACGAGTTGGT
ATCAGTAAGG TGCCGTTTGG TTTTGAAAAC CTGCAGTCGT CTCAAAACAG AGTTGCATTT
GACCGTACAG ATGGTATGAA CAGCTCTGTG TACAATGAGC GCGACCTGGG TGTGTTTTTT
TATTTTACAC CGGACAAAAT AAAGGAACGG TTCAAATACC TGGTAGATTC GGGACTAAAA
GGGACAGGCG ATTATGGTGT GTTTGGTTTT GGAATGTACA ATGGACAAAC AGCAAACAGA
AGTGAGCTGA ACAACTCGCT GCATACAGTG ATGCGTGCTA CCTATCCCTT TCAAGTAAAT
GAGAAACAAA TACTGGAATT AGGCATACAG GGATATTCAG GGTTGTTCCA TGTAGGAGAG
GCTGTTTCCC CTGCAAACGT AGCGCTGGAA GGCAACAATC AGGATTACAC CGATCAACGT
GTGGCCGCTT CGGTAACGTT GTATCCGCAG CCTTTCGGGG TACAGGCAGA ATATATGTAT
GGCAGAGGGC CGGTATATCA ATATAACGGA CCAATGGCGG CCGTAATGCA TGAAATTATT
ACCGGTAGAA ACGAAGGCGG TTATCTGCAG ATTATGTATA TGAGAAAAAT TAAAAACATG
ACGGTAACCC CTTATACAAG AGGGCAGTAT TTTTTTGGCG GGAAAAAGCC GGAATTGGAT
GCCCGTCGCC ATATTGTTAA AGAACTTGAA ATGGGTATTG AATTTCAGAT CATTAAGCAA
TTAGAAGTAA CCCTTGCATA TACGATTTCT GATCGCGTAT TTGAAGATTC CCGTAATCCG
GTTAATCACC AGAAGGGTAA TTTTATGAGA ATGCAGCTGC AGCTCAATTT CTGA
 
Protein sequence
MVCAQAQSLA AKDSVIATPT TSSITASDTK PAETKKKNWY EVISLRGYAQ FRYNRLLETN 
SDLKCDQCDK SIGNNGGFFF RRARLVFSGN IHERVFIYIQ TDVATNATAG STLGLNYLQI
RDFYGDIYLT KDRKLRARVG ISKVPFGFEN LQSSQNRVAF DRTDGMNSSV YNERDLGVFF
YFTPDKIKER FKYLVDSGLK GTGDYGVFGF GMYNGQTANR SELNNSLHTV MRATYPFQVN
EKQILELGIQ GYSGLFHVGE AVSPANVALE GNNQDYTDQR VAASVTLYPQ PFGVQAEYMY
GRGPVYQYNG PMAAVMHEII TGRNEGGYLQ IMYMRKIKNM TVTPYTRGQY FFGGKKPELD
ARRHIVKELE MGIEFQIIKQ LEVTLAYTIS DRVFEDSRNP VNHQKGNFMR MQLQLNF