Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_3816 |
Symbol | |
ID | 4184710 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | + |
Start bp | 4404436 |
End bp | 4405449 |
Gene Length | 1014 bp |
Protein Length | 337 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 638073802 |
Product | hypothetical protein |
Protein accession | YP_680391 |
Protein GI | 110640181 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.380581 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAAAAAC TTATTGTAAC AGTAGCCCTG TCAATCGCAG GATTACTATG TGCTTACGCG CAAACCCCAG CTCCATCACA AAGCTTTGCA GACCATCCCC GGGCCTATAC GCATAGAAAC TCGTTCTGGA CCGAGTACAA CATCAACGGA TCAATCGATT CATTGCAAAG ATGGCAGTAC CAGGTAGATT ATCAATACCG CAGAATGGCT GATGCCAGCT ACATCAAAGA TGGTGATCAG GGAAACATTT TTAAAAATCC ATATCAGCAG GTATTAAGAC CGTGGATTCA CTACTGGGTA ATTCCTAAAA AACTTCGTTT CTCTTTATCT CCTATTGGAT ACTGGATCAC ATGGACTCCG CCGCAGGAAG GCAGTGCTTA TAAGATTGAC GGCCAGGATA AGGGACAGGC AGTATTTCCT GAATTCAGAA TCTGTCCGCA GATAACCGTA AACAGTCAGT TAGGGCGGTT ATTATTTTCA AACCGCTACA GGTACGAATT CAGATACATC GGTAACAGAA CACAATCCAC AAATTTTATG GATGATCTGG GTGATGGTTT CAGCTTTTAC CCGAATGCTA TCGGTTCAGG AAACGGCAGC AGCCACCAGG GCAGGTTACG TTGGCAGATA CGTGCGCAGT TATTACTCAA CAGTTCTAAA ATGCAAAAGA ACACCGTCTA TATAAATGCA TGGAATGAAT TGTTTATAGG AACAGGGAAG CACGTTGACT TCAACAAAAT GCTGAATCAA AACAGAACCG TTGCGTTGTT TGGCTGGAAG CTGCCTACAC AATACCCGAT CCGTATTGAA GCAGGTATTA CCTATCAGGT AAACTATCTG TACAACATTG ATGTAGTGCC TACGCAGCCG GATATTTCAT ACAACAAAAG GAACGTTGAA GCAAACACAG CATATACAAT CTATGTGATC TTTGATGAGT TTCATACGTT GTTTAAAAAG AATGGAAGAA AACCTCAGGA TGAACCTAAG TTCCCGCACC CTGCTGAAAG ATAG
|
Protein sequence | MKKLIVTVAL SIAGLLCAYA QTPAPSQSFA DHPRAYTHRN SFWTEYNING SIDSLQRWQY QVDYQYRRMA DASYIKDGDQ GNIFKNPYQQ VLRPWIHYWV IPKKLRFSLS PIGYWITWTP PQEGSAYKID GQDKGQAVFP EFRICPQITV NSQLGRLLFS NRYRYEFRYI GNRTQSTNFM DDLGDGFSFY PNAIGSGNGS SHQGRLRWQI RAQLLLNSSK MQKNTVYINA WNELFIGTGK HVDFNKMLNQ NRTVALFGWK LPTQYPIRIE AGITYQVNYL YNIDVVPTQP DISYNKRNVE ANTAYTIYVI FDEFHTLFKK NGRKPQDEPK FPHPAER
|
| |