Gene CHU_3816 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_3816 
Symbol 
ID4184710 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp4404436 
End bp4405449 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content43% 
IMG OID638073802 
Producthypothetical protein 
Protein accessionYP_680391 
Protein GI110640181 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.380581 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAC TTATTGTAAC AGTAGCCCTG TCAATCGCAG GATTACTATG TGCTTACGCG 
CAAACCCCAG CTCCATCACA AAGCTTTGCA GACCATCCCC GGGCCTATAC GCATAGAAAC
TCGTTCTGGA CCGAGTACAA CATCAACGGA TCAATCGATT CATTGCAAAG ATGGCAGTAC
CAGGTAGATT ATCAATACCG CAGAATGGCT GATGCCAGCT ACATCAAAGA TGGTGATCAG
GGAAACATTT TTAAAAATCC ATATCAGCAG GTATTAAGAC CGTGGATTCA CTACTGGGTA
ATTCCTAAAA AACTTCGTTT CTCTTTATCT CCTATTGGAT ACTGGATCAC ATGGACTCCG
CCGCAGGAAG GCAGTGCTTA TAAGATTGAC GGCCAGGATA AGGGACAGGC AGTATTTCCT
GAATTCAGAA TCTGTCCGCA GATAACCGTA AACAGTCAGT TAGGGCGGTT ATTATTTTCA
AACCGCTACA GGTACGAATT CAGATACATC GGTAACAGAA CACAATCCAC AAATTTTATG
GATGATCTGG GTGATGGTTT CAGCTTTTAC CCGAATGCTA TCGGTTCAGG AAACGGCAGC
AGCCACCAGG GCAGGTTACG TTGGCAGATA CGTGCGCAGT TATTACTCAA CAGTTCTAAA
ATGCAAAAGA ACACCGTCTA TATAAATGCA TGGAATGAAT TGTTTATAGG AACAGGGAAG
CACGTTGACT TCAACAAAAT GCTGAATCAA AACAGAACCG TTGCGTTGTT TGGCTGGAAG
CTGCCTACAC AATACCCGAT CCGTATTGAA GCAGGTATTA CCTATCAGGT AAACTATCTG
TACAACATTG ATGTAGTGCC TACGCAGCCG GATATTTCAT ACAACAAAAG GAACGTTGAA
GCAAACACAG CATATACAAT CTATGTGATC TTTGATGAGT TTCATACGTT GTTTAAAAAG
AATGGAAGAA AACCTCAGGA TGAACCTAAG TTCCCGCACC CTGCTGAAAG ATAG
 
Protein sequence
MKKLIVTVAL SIAGLLCAYA QTPAPSQSFA DHPRAYTHRN SFWTEYNING SIDSLQRWQY 
QVDYQYRRMA DASYIKDGDQ GNIFKNPYQQ VLRPWIHYWV IPKKLRFSLS PIGYWITWTP
PQEGSAYKID GQDKGQAVFP EFRICPQITV NSQLGRLLFS NRYRYEFRYI GNRTQSTNFM
DDLGDGFSFY PNAIGSGNGS SHQGRLRWQI RAQLLLNSSK MQKNTVYINA WNELFIGTGK
HVDFNKMLNQ NRTVALFGWK LPTQYPIRIE AGITYQVNYL YNIDVVPTQP DISYNKRNVE
ANTAYTIYVI FDEFHTLFKK NGRKPQDEPK FPHPAER