| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_3797 |
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| Symbol | araC |
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| ID | 4184133 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | + |
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| Start bp | 4386525 |
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| End bp | 4387298 |
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| Gene Length | 774 bp |
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| Protein Length | 257 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 638073783 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_680372 |
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| Protein GI | 110640162 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.101891 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCTGGAT TTTCAGTATA CATACCTTGT GATGCATTAA AGCCATTTGT TAAAAGTCTG
GCTATTTCAG AAAATGAACA CGAACAGGTT TATAAAGTAA TTCCGGATAC AGCCCTTGTT
TTAGGTTTTC AATACAAAGG AAAACTGGCG TATCTAGATG GGTCAAATGA ATTGCCGCTG
GCACGTTCGG GTGTAAGCGG ACTGAGTGAT CACTATAAAA TATTTAAAAA CTCGGCGGGT
ATTGGTACCG TGCTGGTTTT CTTTACAGAA ACCGGAGCAG CGCATTTTTT CAAACAGCCG
TTGCATGAAT TATTCAGGGA AAGTATTTCA CTGGATAACT TTATGTTTCA ATCCGAATTG
TTGATTCTGG AAGCACAGCT GGGTGAATCG AAAACAGACC TTGAGCGGAT CTCCGTTGTA
GAACGGTTTT TACTTTCAAA AATCCGTAGT ATTGAACCGG ATAAACTAGT ATTGGCAGCC
CTTGCACTTA TTCATAAAAG CAAAGGCATG ATCCGTATCA CAGAATTGAT GGCGCAGTTA
CACATCAGTC AAAGCCCGTT GGAAAAGAGA TTCAGGCAGG CAGTAGGCGC ATCACCTAAA
AAGTTTTCTT CCATTGTGCG GCTAAAACAT GCTATTCAGC AGCAGACGCA TTCAAACTCC
CTTACTGAAT TAAGTTACGA ACTGGGCTTT TACGATCAGG CACATTTTAT CAAAGAGTTC
AAAAAATTTA CCGGAGATAC ACCAGAGATT TTTTTTTCTT CTCAAAATTC GTAA
|
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| Protein sequence | MAGFSVYIPC DALKPFVKSL AISENEHEQV YKVIPDTALV LGFQYKGKLA YLDGSNELPL
ARSGVSGLSD HYKIFKNSAG IGTVLVFFTE TGAAHFFKQP LHELFRESIS LDNFMFQSEL
LILEAQLGES KTDLERISVV ERFLLSKIRS IEPDKLVLAA LALIHKSKGM IRITELMAQL
HISQSPLEKR FRQAVGASPK KFSSIVRLKH AIQQQTHSNS LTELSYELGF YDQAHFIKEF
KKFTGDTPEI FFSSQNS
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