Gene CHU_3796 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_3796 
Symbol 
ID4184132 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp4385344 
End bp4386477 
Gene Length1134 bp 
Protein Length377 aa 
Translation table11 
GC content37% 
IMG OID638073782 
Productoxidoreductase 
Protein accessionYP_680371 
Protein GI110640161 
COG category[C] Energy production and conversion
[H] Coenzyme transport and metabolism 
COG ID[COG0654] 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.204918 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAATCA ATAACAAACC CTATAAATGT GCTGTTATCG GAGGCGGTGT TGCAGGTCTA 
AGCCTTGCTA TTCAGCTTGC GGACCATGGT CTGGATGTTA TTGTATTTGA AAAGAATACG
TATCCGTTTC ATAAAGTCTG CGGCGAATAT ATTTCAATGG AAAGCTGGAA TTTTTTGCTT
TCATTGGGTT TGCCGCTGAC AGAAATGCAT CTTCCGCATA TAAAACAACT AGGTATTTCT
TCTGAAAAAG GCTTTATGCT TCAGGCACCG TTAGCATTGG GCGGCTTTGG AATAAGCCGT
TTTACACTGG ATCAGCAATT GTATTTTTTA GCAAAGGCAA AGGGCGTCCG GGTTATTGAA
AATTGCAGAG TAACACATGT TACAAACGAT GCTGATCAGA TAACATGCAT CACAACATCT
GCCGGAATAT TTACTGCAGA AATTGTTTGC GGCAGTTATG GAAAATATAC ACCCGCGTTT
GCCAAAAATG AAACCAATTC AAAAAAGGAA GTTATAAATT ACATAGGCGT TAAATATCAT
ATTAAAACTG ATTTCCCAAA TAATAAAATT GAATTGCATA ATTTTGAAGG CGGTTACTGC
GGTATTTCAA AAGTTGAAAA CAATACATAT TGTTTGTGTT ATTTATCTGC TTCAGATCAA
TTGAAGCAGG CAGATAATGA TATAAAAATC CTGGAAGAAA CTATATTGTT TCGGAATAAA
TACCTGAAAC AAATTTTTAC GGAATCGAAA TTTTTGTTTC AGCAGCCTGT TGTTACCAGC
AATGTTACCT TTCATAAAAA AAATACATAT GTAAACGGCA TTTTCTTAGT AGGTGATGCT
GCCGGTTCGA TAACACCGCT CTGCGGAAAC GGCATGAGCA TGGGCTTACG CGGATCATTT
ATTCTGGCGC AACTGTTGAT TTCCTTTTAT AAAACAAACA GCCGTAAAAA ACCGCTGATT
GCCGCATATC AGCATGAATG GAATAAACAG TTTAATACAC GCATACAAAC AGGATATTAT
CTTCAACACC TGTTTGGCAA AAAAAACACA ACACATCTTG TTTTGAAAAC ACTGGATAAA
CTTCCGGGGC TTACTCAAAA AATTATTGGA CTTACGCACG GGAAACCGTT TTGA
 
Protein sequence
MEINNKPYKC AVIGGGVAGL SLAIQLADHG LDVIVFEKNT YPFHKVCGEY ISMESWNFLL 
SLGLPLTEMH LPHIKQLGIS SEKGFMLQAP LALGGFGISR FTLDQQLYFL AKAKGVRVIE
NCRVTHVTND ADQITCITTS AGIFTAEIVC GSYGKYTPAF AKNETNSKKE VINYIGVKYH
IKTDFPNNKI ELHNFEGGYC GISKVENNTY CLCYLSASDQ LKQADNDIKI LEETILFRNK
YLKQIFTESK FLFQQPVVTS NVTFHKKNTY VNGIFLVGDA AGSITPLCGN GMSMGLRGSF
ILAQLLISFY KTNSRKKPLI AAYQHEWNKQ FNTRIQTGYY LQHLFGKKNT THLVLKTLDK
LPGLTQKIIG LTHGKPF