Gene CHU_3794 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_3794 
SymbolbcsA 
ID4184130 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp4383584 
End bp4384672 
Gene Length1089 bp 
Protein Length362 aa 
Translation table11 
GC content39% 
IMG OID638073780 
Productnaringenin-chalcone synthase 
Protein accessionYP_680369 
Protein GI110640159 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3424] Predicted naringenin-chalcone synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.21941 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGTTATA TTGCAGCGAT AGAAACGAGT GTGCCGGAGC ATATGCATAC ACAAAAAGAG 
TTTACAACCT TTTATGCAAA TTCCACAGAG GATGTTGACG TTCAGCGGAA GATTAAAATT
ATTGCTTCTA AAACAGGAAT TGAAAAGCGG TATTCGGTGC TAAAGGATTT TAATGCTCAG
CCGGAAGATT TTGAATTTTT TCCAAAGGAT GCTTCATTAC TTCCAGAACC CGGATTGTCA
AAACGTATGG AGATCTTTAA CAAAGAAGCT CTTCAGCTTT CCATTAAAAC AATATCAAAG
ATTCCGGAAT TCGATCATAT TAAAAATACA ATCACGCACC TGATCACCGT AACGTGTACC
GGTTTATTTG CACCGGGTCT GGATATACAG TTGATCCAGG CATTAGCATT GAAGCCGTCC
ATTAACAGAA GCAGCATTAA TTTTATGGGT TGTAATGCCG CCATACTTGC GTTGAAGCAG
GCGGATGTTA TCTGTAAGGC AAATGGAAAT GCAAACGTAC TAATTGTATG CACGGAATTA
TGTTCGATCC ATTTTCAAAA AGATTATTCG GATGACTATA TTATCTCAAA TCAGTTGTTC
GGAGATGGTT GTGCTGCTGT ACTTGTAACG GCTGATCCGG TAGCATATGC AACGGATCAA
TTAGTTAAAA TAAATGAATT TCACTCCTTG CTTTTACATA AAGGCTATAA TGATATGGCC
TGGCAGTTAT CGGAAACAGG TTTTAGAATG AATTTGACAA CGTATGTGTC AGACCTGATC
AATGGCAATA TTAAACAGAT GCTTGCAGAC ATAAATGTTG ATGCGAATGC CATTAATTTT
TGGGCCGTAC ATCCCGGAGG CAGAAAAATT ATTGATGGCT TTTGTGAGGC ATTGCGATTA
GATAAAGGTC AGCTGGAAGC TTCTTATGAT GTATTAAAAA ATTACGGAAA TATGTCTTCC
CCGACAATCC TTTTTGTATT GAAACAGGTG CTTGATGGAA ACAAAGAATC TGCAAAAGGC
AAATCCCTAT TGACAGCTGC GTTTGGGCCA GGATTGAGTA TAGAAACGCT TACGCTGGTA
TATGCTTAA
 
Protein sequence
MSYIAAIETS VPEHMHTQKE FTTFYANSTE DVDVQRKIKI IASKTGIEKR YSVLKDFNAQ 
PEDFEFFPKD ASLLPEPGLS KRMEIFNKEA LQLSIKTISK IPEFDHIKNT ITHLITVTCT
GLFAPGLDIQ LIQALALKPS INRSSINFMG CNAAILALKQ ADVICKANGN ANVLIVCTEL
CSIHFQKDYS DDYIISNQLF GDGCAAVLVT ADPVAYATDQ LVKINEFHSL LLHKGYNDMA
WQLSETGFRM NLTTYVSDLI NGNIKQMLAD INVDANAINF WAVHPGGRKI IDGFCEALRL
DKGQLEASYD VLKNYGNMSS PTILFVLKQV LDGNKESAKG KSLLTAAFGP GLSIETLTLV
YA