Gene CHU_3789 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_3789 
Symbol 
ID4184125 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp4380831 
End bp4381244 
Gene Length414 bp 
Protein Length137 aa 
Translation table11 
GC content40% 
IMG OID638073775 
Producthypothetical protein 
Protein accessionYP_680364 
Protein GI110640154 
COG category[S] Function unknown 
COG ID[COG3832] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.101891 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGAAATA AAATAACTGT TGAAGTAACA GTATACGCGG CAATCGAAAA AGTATGGAAA 
TACTGGAACG AACCTGCACA CATCATGAAG TGGTGCCAGG CATCGCCGGA ATGGCATGTG
CCTGCTGCCC AAAATGACTT AAAAGCGGGC GGTACATTTA CAACAACAAT GGCAGCAAAA
GACGGCAGCA TGAGTTTTGA TTTTGGCGGG GTGTATGATC AGGTAAAAAC AAATGATCTG
ATCGAATATA CGATAGGCGA TGGAAGAAAA GTACGAATTG TTTTTACGCA TACAGGAGAT
ACAACAAACA TTGTTGAAAG TTTTGATCCG GAAGAAACCA ATCCAAGAGA GCTGCAGCAA
AGTGGCTGGC AGGCAATTTT AAATAGTTTT AAATCATATA CTGAAAATAA TTAA
 
Protein sequence
MGNKITVEVT VYAAIEKVWK YWNEPAHIMK WCQASPEWHV PAAQNDLKAG GTFTTTMAAK 
DGSMSFDFGG VYDQVKTNDL IEYTIGDGRK VRIVFTHTGD TTNIVESFDP EETNPRELQQ
SGWQAILNSF KSYTENN