| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_3762 |
|---|
| Symbol | |
|---|
| ID | 4186736 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cytophaga hutchinsonii ATCC 33406 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008255 |
|---|
| Strand | + |
|---|
| Start bp | 4351981 |
|---|
| End bp | 4353051 |
|---|
| Gene Length | 1071 bp |
|---|
| Protein Length | 356 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 638073749 |
|---|
| Product | fatty acid desaturase |
|---|
| Protein accession | YP_680338 |
|---|
| Protein GI | 110640128 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG3239] Fatty acid desaturase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 0.761835 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACCTC CTAAATTTCT TATCCCATCT ACGCCATTTT TCTCTGAAAT GAGAAAAAGA
ATCAATTCAC ATTTTATAGA AGTTGAATCA AAACCGACAG GCGGTATCCG TCTATATCTT
AAAGCAACCA TCATACTTTC TTTTTTTATT GGAATGTATG TACATGTTGT TTTTTTTACT
TCATCGTATA TATTTATAAG CCTTACTGAA TGTATGCTGC TTGGTATTGC AACAGCAGCA
ATCGGTTTTA ATATCATGCA CGACGGTGCA CATGGAAGCT TCAGTAAAAG AGCCTGGATA
AACGAACTGG CAGGTCTTTC GCTTAATGTA TTTGGAGCAA ATGTATTTAT GTGGAAGTCC
AAACACAATG TCATACATCA TACATTCACA AACATTGAAG GCGTGGACGA TGATATTGAT
GCAAAACCGT TTTTGCGCCT ATGCGACAAT CAGAAAAAAT ATCAGATCCA TCGGTTTCAG
CATTTCTACT TTTGGGCAGT GTATGCCTTT TTATACATGT ACTGGATTTT CTTTACAGAT
TATAAAAAAT ACTTTACAGG TAAAGTAGGA GAAATCTCCA TAAAAAAAAT GATTGTGCTG
GATCACATAA CATTCTGGGG GTTTAAATTA GCCCATATTA TGCTGTTTGT AGCACTCCCA
ATCTACCTGG TAGGTTTCCT TCCCTGGTTT ATCGGATTTA TGACCTATGC GTTATGTACA
GGCTTTATTA TGAGTATTGT ATTTCAGCTT GCCCACACGG TTGAAGATGC ACATTTTCCA
ATGGTTGATA CTGCTACCGG TATGCTGGAA GATGAGTGGG CGTTACATCA ATTGAAAACA
ACAAGCAATT TTGCAACAAA AAATAAAATG GTGTCGTGGT TATCTGGCGG ATTAAATTTT
CAGATCGAAC ATCATTTATT CCCTCATATT TCTCACATAC ACTATCCGGC AATCAGTAAA
ATTGTAAAAC AGGTATGTGA AGAATATGAC ATCAGATATA ATGAATATAC GGGTGTACGT
TTCGCAATCG TATCTCATAT CGTGCATTTA AAACAAATGG GAATGAGATA G
|
|---|
| Protein sequence | MKPPKFLIPS TPFFSEMRKR INSHFIEVES KPTGGIRLYL KATIILSFFI GMYVHVVFFT
SSYIFISLTE CMLLGIATAA IGFNIMHDGA HGSFSKRAWI NELAGLSLNV FGANVFMWKS
KHNVIHHTFT NIEGVDDDID AKPFLRLCDN QKKYQIHRFQ HFYFWAVYAF LYMYWIFFTD
YKKYFTGKVG EISIKKMIVL DHITFWGFKL AHIMLFVALP IYLVGFLPWF IGFMTYALCT
GFIMSIVFQL AHTVEDAHFP MVDTATGMLE DEWALHQLKT TSNFATKNKM VSWLSGGLNF
QIEHHLFPHI SHIHYPAISK IVKQVCEEYD IRYNEYTGVR FAIVSHIVHL KQMGMR
|
|---|
| |