Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_3760 |
Symbol | ahpC |
ID | 4186734 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | - |
Start bp | 4350221 |
End bp | 4350778 |
Gene Length | 558 bp |
Protein Length | 185 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 638073747 |
Product | peroxiredoxin |
Protein accession | YP_680336 |
Protein GI | 110640126 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0450] Peroxiredoxin |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 0.493172 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAAATA GAATCTTAAG CGTGGGAAGC GCATTTCCTG CATTCAAAAA AACAGCTGTA GTATCCATCG AGAAAGGAAA AGAATTTACA GAAATCTCTT CTGAAAATCT TGTGAACGAA GACAATCAAT GGACAGTAAT GTTCTGGTGG CCAAAGGATT TTACATTTGT TTGTCCGACA GAGATTGCTG AATTCAACAA TGCGTTCGGT GATTTCAGAG ACAGAGATAC CACATTGATC GGTGCATCCA CCGATTCAGA ATTTGTACAC GCAGCCTGGA GAAGAGATCA TGAAGATTTA CGTGGATTAA AATTCCCTAT GCTGGCTGAT ACTTCTAAAT CACTTGCTGA AGAGTTAGGT ATTTTAGAAG CCGCAGAAAA AGTGGCCTTG CGTGCTACAT TTATTATAGA CCCACAGGGA ATAATCCGTT GGGTAAGCGT AAATGACTTA AATGTGGGCA GAAATGTGAA AGAAGTTATC CGTGTATTGG ATGCCTTACA AACAGATGAA TTGTGCCCAT GTAACTGGGA AAAAGGACAG GAAACAATTC ATGCTTAA
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Protein sequence | MQNRILSVGS AFPAFKKTAV VSIEKGKEFT EISSENLVNE DNQWTVMFWW PKDFTFVCPT EIAEFNNAFG DFRDRDTTLI GASTDSEFVH AAWRRDHEDL RGLKFPMLAD TSKSLAEELG ILEAAEKVAL RATFIIDPQG IIRWVSVNDL NVGRNVKEVI RVLDALQTDE LCPCNWEKGQ ETIHA
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