Gene CHU_3741 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_3741 
SymbolleuA 
ID4185122 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp4323479 
End bp4324639 
Gene Length1161 bp 
Protein Length386 aa 
Translation table11 
GC content43% 
IMG OID638073728 
Product2-isopropylmalate synthase 
Protein accessionYP_680317 
Protein GI110640107 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0119] Isopropylmalate/homocitrate/citramalate synthases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGAAAGA GAATTTTCGT TTTCGACACA ACACTTAGAG ATGGTGAACA GGTCCCTGGT 
TGTCAATTGA ACACTGAGGA AAAAATCATC GTTGCGAAAG CGTTGGACGA ATTAGGTGTC
GACGTAATCG AAGCAGGTTT CCCGGTTTCA AGCCCAGGAG ACTTTAATTC AGTTGTAGAA
ATTACCAAAG CAGTAACGCG CCCTACTATT TGCGCACTTA CACGTGCCAA AGAAGCGGAC
ATCAATATTG CCGGTGAAGC CCTGCGTTTT GCAAAGCGCA GCCGTATTCA TACAGGTATT
GGCAGTTCGG ATATTCATAT TGAACATAAA CTTCGTTCTA CCCGTGAAAA CATTCTTGAA
ATGGCTGTAG CTGCTGTAAA GCAAGCGAAG AAGGTTGTTC ATGAAGTTGA GTTCTTCTGC
GAAGATGCAG GCCGCGCAGA TCAGGCATTC CTTGCACGTA TGGTTGAAGC GGTAATTGAA
GCAGGTGCAG ACGTAGTAAA CATTCCCGAT ACAACAGGCT ATATGTTGCC ATGGCAGTAT
GGTGAGCGTA TCAAATATTT GATGGACAAT GTATCAAATA TTGATAAAGC TATTTTATCT
GCGCATTGCC ACAACGATTT AGGGTTGGCA ACAGCTAATT CTCTTGCAGC CTTACAAAAC
GGTGCACGTC AGGTTGAATG TACAATCAAC GGTATCGGTG AACGTGCCGG TAATACAGCA
CTTGAAGAAG TAGTAATGGC GATGGAATGT CACAAAGAGA CGTTAGGCCT TGAGACAGGA
ATCAATCATA AGAAATTGGT TCCGATCAGT CATTTGGTAT CCACGTTGAT GCGTATGCAG
GTTCAATCAA ACAAAGCAAT TGTTGGCAGA AATGCATTTG CACACTCTTC AGGTATTCAC
CAGGATGGTT TCTTAAAGCA CCGTGAAACA TACGAGATCA TTGATCCGGC TGCTGTTGGA
GCAGATTCTT CTTCGATCAT TCTTACTGCA CGCAGCGGAC GTGCAGCATT GAATCACCGT
TTGGCAACAA TCGGTTACAT GTTGTCTAAA GATCAATTGG ATCAGGCATA TACACAGTTC
CTGGATATGG CCGATCATTT GAGAAAAGTC GAAGACGAAA ACTTACACGA ATTAATGCGT
GGTAAAGTTT ACGCGAAATA A
 
Protein sequence
MGKRIFVFDT TLRDGEQVPG CQLNTEEKII VAKALDELGV DVIEAGFPVS SPGDFNSVVE 
ITKAVTRPTI CALTRAKEAD INIAGEALRF AKRSRIHTGI GSSDIHIEHK LRSTRENILE
MAVAAVKQAK KVVHEVEFFC EDAGRADQAF LARMVEAVIE AGADVVNIPD TTGYMLPWQY
GERIKYLMDN VSNIDKAILS AHCHNDLGLA TANSLAALQN GARQVECTIN GIGERAGNTA
LEEVVMAMEC HKETLGLETG INHKKLVPIS HLVSTLMRMQ VQSNKAIVGR NAFAHSSGIH
QDGFLKHRET YEIIDPAAVG ADSSSIILTA RSGRAALNHR LATIGYMLSK DQLDQAYTQF
LDMADHLRKV EDENLHELMR GKVYAK