Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_3741 |
Symbol | leuA |
ID | 4185122 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | + |
Start bp | 4323479 |
End bp | 4324639 |
Gene Length | 1161 bp |
Protein Length | 386 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 638073728 |
Product | 2-isopropylmalate synthase |
Protein accession | YP_680317 |
Protein GI | 110640107 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 42 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGAAAGA GAATTTTCGT TTTCGACACA ACACTTAGAG ATGGTGAACA GGTCCCTGGT TGTCAATTGA ACACTGAGGA AAAAATCATC GTTGCGAAAG CGTTGGACGA ATTAGGTGTC GACGTAATCG AAGCAGGTTT CCCGGTTTCA AGCCCAGGAG ACTTTAATTC AGTTGTAGAA ATTACCAAAG CAGTAACGCG CCCTACTATT TGCGCACTTA CACGTGCCAA AGAAGCGGAC ATCAATATTG CCGGTGAAGC CCTGCGTTTT GCAAAGCGCA GCCGTATTCA TACAGGTATT GGCAGTTCGG ATATTCATAT TGAACATAAA CTTCGTTCTA CCCGTGAAAA CATTCTTGAA ATGGCTGTAG CTGCTGTAAA GCAAGCGAAG AAGGTTGTTC ATGAAGTTGA GTTCTTCTGC GAAGATGCAG GCCGCGCAGA TCAGGCATTC CTTGCACGTA TGGTTGAAGC GGTAATTGAA GCAGGTGCAG ACGTAGTAAA CATTCCCGAT ACAACAGGCT ATATGTTGCC ATGGCAGTAT GGTGAGCGTA TCAAATATTT GATGGACAAT GTATCAAATA TTGATAAAGC TATTTTATCT GCGCATTGCC ACAACGATTT AGGGTTGGCA ACAGCTAATT CTCTTGCAGC CTTACAAAAC GGTGCACGTC AGGTTGAATG TACAATCAAC GGTATCGGTG AACGTGCCGG TAATACAGCA CTTGAAGAAG TAGTAATGGC GATGGAATGT CACAAAGAGA CGTTAGGCCT TGAGACAGGA ATCAATCATA AGAAATTGGT TCCGATCAGT CATTTGGTAT CCACGTTGAT GCGTATGCAG GTTCAATCAA ACAAAGCAAT TGTTGGCAGA AATGCATTTG CACACTCTTC AGGTATTCAC CAGGATGGTT TCTTAAAGCA CCGTGAAACA TACGAGATCA TTGATCCGGC TGCTGTTGGA GCAGATTCTT CTTCGATCAT TCTTACTGCA CGCAGCGGAC GTGCAGCATT GAATCACCGT TTGGCAACAA TCGGTTACAT GTTGTCTAAA GATCAATTGG ATCAGGCATA TACACAGTTC CTGGATATGG CCGATCATTT GAGAAAAGTC GAAGACGAAA ACTTACACGA ATTAATGCGT GGTAAAGTTT ACGCGAAATA A
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Protein sequence | MGKRIFVFDT TLRDGEQVPG CQLNTEEKII VAKALDELGV DVIEAGFPVS SPGDFNSVVE ITKAVTRPTI CALTRAKEAD INIAGEALRF AKRSRIHTGI GSSDIHIEHK LRSTRENILE MAVAAVKQAK KVVHEVEFFC EDAGRADQAF LARMVEAVIE AGADVVNIPD TTGYMLPWQY GERIKYLMDN VSNIDKAILS AHCHNDLGLA TANSLAALQN GARQVECTIN GIGERAGNTA LEEVVMAMEC HKETLGLETG INHKKLVPIS HLVSTLMRMQ VQSNKAIVGR NAFAHSSGIH QDGFLKHRET YEIIDPAAVG ADSSSIILTA RSGRAALNHR LATIGYMLSK DQLDQAYTQF LDMADHLRKV EDENLHELMR GKVYAK
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