Gene CHU_3740 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_3740 
Symbol 
ID4185121 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp4321905 
End bp4322921 
Gene Length1017 bp 
Protein Length338 aa 
Translation table11 
GC content41% 
IMG OID638073727 
Producthypothetical protein 
Protein accessionYP_680316 
Protein GI110640106 
COG category[R] General function prediction only 
COG ID[COG4867] Uncharacterized protein with a von Willebrand factor type A (vWA) domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCTTCAGC TTACTAATGG TGATGTTTCT GAGACACTTA CCTGGATGAA TGAACTGGAT 
CAGCAATACA AATTTACAGA CCCTTCGTAC GGAATGGGTG ATTTTATCAA TGACCTGAAA
GAAAATGGAT TTATTACCGA TGTTCCCGGA AGCGGCAATA TTCCTCAGCC TACTTCAAAA
ACAGAGCAAA GTATCCGCAA ATCTGCGTTG GAAGAAATTT TCGGAAAGCT GAAAAAGAAC
TCCGTTGGAA ACCACAAGAC AACAAAAAGC GGCCTTGGCG ACGAATTCAA TTCCGAATCC
AGGCCGTTTC AATTTGGCGA TACGCTGGAT TCCATAGACA TGACTTCTTC TATTCACAAT
GCACAGATCA ATCACGGCAT CGATGAATTT AAATTATACG ATGAAGATCT CAGTGTTCGC
GAGCGTGAAC ATAAATCTTC CAGCTCAACG GTTTTAATGA TCGACATTTC ACACTCCATG
ATTTTATATG GAGAAGACCG CATTACGCCT GCTAAAAAAG TAGCCATGGC ATTGGCGGAA
CTAATTAAAA TAAAATACCC CAAAGACACC CTGGATATTA TCGTTTTTGG AGACGATGCC
TGGCCGGTTG AACTCAGGGA TCTTCCCTTT CTGCAGGTTG GACCTTACCA TACCAATACC
TATGCGGGAC TGGAGCTGGC TATGGATATT CTGCGCAGAA GAAAGACATC CAACAAACAG
ATTTTCATGA TCACGGATGG CAAGCCTACC TGTATCAAAG AACACGGGAG ATATTATAAA
AACAGTTTTG GTCTGGACCG GAAAGTAATT ACAAAAACGA TGAACATGGC TGCGCAATGT
CGCAGATTAA AAATCCCGAT TACAACGTTT ATGATTGCCC GTGACCCATA CTTACAGCAA
TTCGTGCGTG AGTTTACCCA AACCAATAAT GGCAAGGCTT TTTATAGCGG CCTTGATGGT
TTGGGTGATT TTGTTTTTGA AGATTACATA AAAAACAGGA AAAAGAATAT TCGCTAA
 
Protein sequence
MLQLTNGDVS ETLTWMNELD QQYKFTDPSY GMGDFINDLK ENGFITDVPG SGNIPQPTSK 
TEQSIRKSAL EEIFGKLKKN SVGNHKTTKS GLGDEFNSES RPFQFGDTLD SIDMTSSIHN
AQINHGIDEF KLYDEDLSVR EREHKSSSST VLMIDISHSM ILYGEDRITP AKKVAMALAE
LIKIKYPKDT LDIIVFGDDA WPVELRDLPF LQVGPYHTNT YAGLELAMDI LRRRKTSNKQ
IFMITDGKPT CIKEHGRYYK NSFGLDRKVI TKTMNMAAQC RRLKIPITTF MIARDPYLQQ
FVREFTQTNN GKAFYSGLDG LGDFVFEDYI KNRKKNIR