Gene CHU_3729 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_3729 
SymbolnadC 
ID4185110 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp4308321 
End bp4309226 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content41% 
IMG OID638073716 
Productnicotinate-nucleotide pyrophosphorylase [carboxylating] 
Protein accessionYP_680305 
Protein GI110640095 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0157] Nicotinate-nucleotide pyrophosphorylase 
TIGRFAM ID[TIGR00078] nicotinate-nucleotide pyrophosphorylase 


Plasmid Coverage information

Num covering plasmid clones49 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGATTACAG AATATTTATT TATCTATATA ATCCATTATT TTTGCCTCAT GCATTATACC 
TATTTAACAA CAGACGCTCT GTTGGCATTT ATTGATCTGG CGCTCAAGGA AGATGTCGGT
GATGGCGATC ATACTTCTCT GGCTTCTATC CCCGCAGGCA CAGAAGGAAA AGCGCAGTTA
ATTTTAAAGG ACACAGGGAT TTTAGCCGGT ATTGAACTTG CTGAAATGAT CTTCAAACGG
GTTGATCCGG CTTTGGAACT GGATATAAAA ATGCATGATG GAGACACCTT CAAGCCAGGG
CAAATAGCGC TGACGGTTAA CGGGTCTGTT CATTCCATCC TCATCGCTGA ACGCCTGGTA
TTAAACACCA TGCAGCGCAT GAGTGGTATT GCTACGTATA CACATTCGTT ACAGGAGCTT
ATTGCCCATA CAAAAGCAAA AGTACTTGAT ACCCGTAAAA CAACACCCAA TTTCCGGATG
CTGGAAAAAT GGGCCGTTAA AATCGGAGGA GGCGTCAACC ACCGGTATGG TTTATTTGAT
ATGATTCTCT TAAAAGATAA TCACGTTGAT TTTTCAGGCG GTGTAGCTCA GGCGTTAAAA
AACAGTAAGG CATATGTTGC TAAAACCGGG CGTGATTTAA AAATTGAAAT TGAAACGCGC
AATTTATCTG AAGTAAAAGA AGCACTTCGT GAAGGCGGCG CTTTCAGAAT TATGCTGGAC
AATATGAGTC CTGCTTTAAT GAAAGAAGCG GTAGCACTGA TAAATGGTAA CGCTGAAGTT
GAAGCTTCAG GAGGTATAAA TGAATCTACC ATTGTTGCTG TTGCCGAATC AGGCGTTGAC
TATATTTCTG TTGGCTCGCT GAGCCACAGT TATAAAAGTA AAGATATGAG TCTTAAAGCT
TTCTGA
 
Protein sequence
MITEYLFIYI IHYFCLMHYT YLTTDALLAF IDLALKEDVG DGDHTSLASI PAGTEGKAQL 
ILKDTGILAG IELAEMIFKR VDPALELDIK MHDGDTFKPG QIALTVNGSV HSILIAERLV
LNTMQRMSGI ATYTHSLQEL IAHTKAKVLD TRKTTPNFRM LEKWAVKIGG GVNHRYGLFD
MILLKDNHVD FSGGVAQALK NSKAYVAKTG RDLKIEIETR NLSEVKEALR EGGAFRIMLD
NMSPALMKEA VALINGNAEV EASGGINEST IVAVAESGVD YISVGSLSHS YKSKDMSLKA
F