Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_3729 |
Symbol | nadC |
ID | 4185110 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | - |
Start bp | 4308321 |
End bp | 4309226 |
Gene Length | 906 bp |
Protein Length | 301 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 638073716 |
Product | nicotinate-nucleotide pyrophosphorylase [carboxylating] |
Protein accession | YP_680305 |
Protein GI | 110640095 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0157] Nicotinate-nucleotide pyrophosphorylase |
TIGRFAM ID | [TIGR00078] nicotinate-nucleotide pyrophosphorylase |
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Plasmid Coverage information |
Num covering plasmid clones | 49 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGATTACAG AATATTTATT TATCTATATA ATCCATTATT TTTGCCTCAT GCATTATACC TATTTAACAA CAGACGCTCT GTTGGCATTT ATTGATCTGG CGCTCAAGGA AGATGTCGGT GATGGCGATC ATACTTCTCT GGCTTCTATC CCCGCAGGCA CAGAAGGAAA AGCGCAGTTA ATTTTAAAGG ACACAGGGAT TTTAGCCGGT ATTGAACTTG CTGAAATGAT CTTCAAACGG GTTGATCCGG CTTTGGAACT GGATATAAAA ATGCATGATG GAGACACCTT CAAGCCAGGG CAAATAGCGC TGACGGTTAA CGGGTCTGTT CATTCCATCC TCATCGCTGA ACGCCTGGTA TTAAACACCA TGCAGCGCAT GAGTGGTATT GCTACGTATA CACATTCGTT ACAGGAGCTT ATTGCCCATA CAAAAGCAAA AGTACTTGAT ACCCGTAAAA CAACACCCAA TTTCCGGATG CTGGAAAAAT GGGCCGTTAA AATCGGAGGA GGCGTCAACC ACCGGTATGG TTTATTTGAT ATGATTCTCT TAAAAGATAA TCACGTTGAT TTTTCAGGCG GTGTAGCTCA GGCGTTAAAA AACAGTAAGG CATATGTTGC TAAAACCGGG CGTGATTTAA AAATTGAAAT TGAAACGCGC AATTTATCTG AAGTAAAAGA AGCACTTCGT GAAGGCGGCG CTTTCAGAAT TATGCTGGAC AATATGAGTC CTGCTTTAAT GAAAGAAGCG GTAGCACTGA TAAATGGTAA CGCTGAAGTT GAAGCTTCAG GAGGTATAAA TGAATCTACC ATTGTTGCTG TTGCCGAATC AGGCGTTGAC TATATTTCTG TTGGCTCGCT GAGCCACAGT TATAAAAGTA AAGATATGAG TCTTAAAGCT TTCTGA
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Protein sequence | MITEYLFIYI IHYFCLMHYT YLTTDALLAF IDLALKEDVG DGDHTSLASI PAGTEGKAQL ILKDTGILAG IELAEMIFKR VDPALELDIK MHDGDTFKPG QIALTVNGSV HSILIAERLV LNTMQRMSGI ATYTHSLQEL IAHTKAKVLD TRKTTPNFRM LEKWAVKIGG GVNHRYGLFD MILLKDNHVD FSGGVAQALK NSKAYVAKTG RDLKIEIETR NLSEVKEALR EGGAFRIMLD NMSPALMKEA VALINGNAEV EASGGINEST IVAVAESGVD YISVGSLSHS YKSKDMSLKA F
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