| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_3727 |
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| Symbol | |
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| ID | 4185108 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | + |
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| Start bp | 4303981 |
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| End bp | 4307652 |
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| Gene Length | 3672 bp |
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| Protein Length | 1223 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638073714 |
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| Product | b-glycosidase, CBM9 module, glycoside hydrolase family 8 protein |
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| Protein accession | YP_680303 |
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| Protein GI | 110640093 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3405] Endoglucanase Y |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0598979 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCAAAT TAATGAACAA AATCAGTTGG GTAGTTATAT CTGTGTTGTG CTTAATACAT
GTTCAAACAC ACGCTCAGAT TAATACACCT GCAGGAGCAA CAGTGCCATT TGGCTCAAAC
AATTCTTATG CATATGGTAT CTTGCCTACA AACTTACCTA CAAGCGGTAC GTACGGAAAG
GGTACTGAAG TTGCCGCAAA GTATACGGCA TGGAAGTCTG CCTATATAGA AAACTGCGGT
ACCGATAAGG CACGTGTTAA ATTTGATAAC ACATCAGAAA CCGTATCGGA AGGTATTGCC
TATGGTATGT TATTGGCAGC ATATGCCGCT GATCAGGATT TATTTAACAG ACTTTGGGCA
TATTATAAAC AACACAGAAA TGCTAAAGGT GTAATGCACT GGAAGATCAG TGGCTGTAAT
TCAGTTATTG GTCAGAATGG CGCTACAGAT GCAGAATTGG ATGCGGCAAT GGCGTTAATT
GTGGCGAATT ATCAATGGCC GAACACCACT TCTCCGCACA ATTATAAAAC AGACGCAGTA
TCATTGATAA ATGCTATTAA GAATTACGAG ATTAATGCGA CAGATTTTAC ATTTGAAAAT
GGAGATGCGT GGAAACCAGC CTGTAGAAAT CCATCGTATC AGGCACCGGG TTATGCACGC
GTGTTTAAAT TGTTTATGGC AGAGAATGGC CAGGCTAACA ATACATTCTG GGATAATGTA
ATTCAAAAGA CAGAAAATTT ATTAATTAAT AATGCACATA CTACTTCCGG TCTATCTACG
AACTGGTGTA CCCCTGCTGG CCCGCCAAAT TCATCGTGCA GCGGTTCAGG CACAGCGCCG
GATAAATTCG GCTATGATGC ATGCCGTGCT CCGTGGAGGC AGGCCACGGA TTATATCTGG
TATGGCCCAT CAACAATTTT AACTATTACA AATAGACAGG CAGCATTCTG GATTGGCAAA
GGCGGCGCAG GTTCTGTTCA GGGTGGTGAC GGTGTTAACC ACGACGGTTC AGGATCAGGC
AATCACAATG CAGCATTTGT TGGTCCGATT GGTGCATTAT CTTTAGCTAC AACCAATACA
ACAGCTAATC AGCAATTTTG TAACGCACTT TATTCAGAAA ATAAAAATGA TGGTTTAGCC
AGTGGCTACT TTACCAAGAT TTTACAGATG TTAGGGTTAT TTGTGCAAAC TGGTAATTTC
TGGAATCCAT ATGCGGTATC ATCTGCAACA ACGACATCTG TAGCGCTTAC TGCGCCTACA
GTAACGTTTG CTGCAGAAGG TGATGTCATC ACGGTAAGTG CAACGGCAAC GGCAACAACC
GGCGCCATTT CTAAAGTAGA TTTTTATGCA GGTACTACAT TAATCGGTAC AGATAACAGT
TCACCATATT CTATCAGCTG GACACCCAAT GTAAGCGGTA CGGTAAGCAT TACTGCAAAA
GCAACAAACA CAAACGGAGA TGTTGCAACA ACGGCTCCAT TTAATGTTTC GATTTACAAA
GCCGTTAACC AGACAAATAC AGCACCAACG ATAGATGGCG TTGCAGATGG CGTTTGGGGA
GGAACAAACA CAAGCGCATC GCTGAATAAT GTGATTGATG GAACAGTTGC CAATGCTTCT
GATTTATCCG CAAATTATAA AGCCATGTGG GATGCAACCT ATTTCTATGT ATTGGTGAAT
GTAACCGATA ATGTAAAAAC GAATAATGGC GGAACAGATT ATTACAATGA TGATGCCGTT
GAAGTATTCT TTGATATCGG CAATAATAAA ACAACAACCT ACGGTGCGAA TGATTTTCAG
TATACATTCC GCTGGAATGA TAATACTATT TATGAGAAGA ACAATAAGAC TACAGGTGTA
ACATTTGCAA GAGTAGATAA TTCTACCGGC TATGTAATGG AAATGCGCTT CCCATGGTCT
ACATTGACCG GGTCGCCGGC TATTAACCAA TTGGTAGGTT TTGATGTGGC GGTAAATGAT
GATGACGATG GAAATGCAAG AGACCGTAAA ATCTCCTGGG CGGCAACAGC GGATCAGGCA
TGGACAAATC CATCTTACAT GGGTACAGTA ATTTTAAAAG GTGCACCCGC ATGTACCTTA
CCATCTGCAG CAGGAACAAT AACAGGTACA ACAACAACGT GTGCCAACGC AGCAGGTATT
ACCTATTCCA TAGCTGCGGT AACAGGCGCA ACGGGTTATA CCTGGACTGT ACCGGCCGGT
GCAACCATCA CAGCCGGTGC AAATACAACA GCAATAACAG TAAAATTTGG TACCACAGCA
GGCAACATTA GTGTTACACC TGCAAACACC TGTGGTAACG GTACTGCTGC AACAACAGCT
GTTACCCTTA ATAGTTTACC ATCTGCAGCA GGAAGCATAA CAGGTATTAC AACAACATGT
GCCAACGCAG CAGGTATTAC CTATTCCATT GCAGCGGTTA CCGGTGCAAC AGGCTATAAC
TGGACTGTAC CGGCAGGTGC AACGATCACA TCGGGTACCA ATACAAGAAC CATTACAGTA
ACATTCGGTA CAACAGGCGG CAATGTTTCC GTTACGCCAA CAAATACATG TGGTAACGGA
ACAGCTGCAA GTACTGCTGT TACCGTTAAT AGTTTACCAG CTGCTGCAGG AGATATAACG
GGTGTAACAA CAACCTGTGC AAATACAGCC GGCGTTACCT ATTCCATTGC TGCAGTAACA
GGCGCAACAG GTTATAGCTG GACTGTACCA GCTGGCGCAA CCATCACTGC AGGTGCAAAT
ACGCGAACAA TAACGGTAAC ATTTGGCACA GCCGGCGGTA ACGTTACGGT AACACCTACA
AACACATGCG GTAACGGCAC AAATAAAACA ACCGCTGTTA CAGTGAATGC AAGCGGTGGA
AATGCTTCGG TAAGTATTGC CGCATCTCCT TCATCCACTA TATATACAGG ACAGTCTGTT
ACCTTTACAG CAACACCAGT TAACGGAGGA ACGCCAACAT ATCAATGGAA AAATGGCAGT
ACCAACATTG CAGGTGCAAC AGCTGCAACC TACACAACAA CTTCATTGAC AAACGGAAAT
GCAATCAGTG TAACCATGAC TTCAACAAAG CAGTGTGTTG CAAATACTAC AGCAAATTCA
AACACAATTA CAATGACGGT TACTGCAGCT CCGGCCTTTA GTTCAACCAT CAACGGACCA
ACAGTAGTTT CACCAAATCA GTCAAATGTA ACATTCTCTG TTTCCAACCA AAGCGGCATG
CAATATCAAT GGACGGTACC GCCTGGAGCA ACAATTGTGA GCGGTGCAAA TACAAATTCG
ATTGTAGTAA ACTTTGGAAC ATCCGGCGGA AATGTAACGG TAAAGGAAAC GAATCCATCT
AACCAAACTA CTACGATTAC CAAAGCGATT ACGGTAAGCG GAACAACACC GGTTTACTTA
CCTGCGCAGG AAGTTAATAT CTCCGTGTAT CCGGTTCCAT GTAACGAACA GCTCATGATT
GCAATGGGTG TTGAAGCTTC AACAAAAGTA TCCTTCAGTA TAATTGATAT GACAGGAAAT
ACGATTCAGT CTGGTTCATT TGAATATAAC AGCATGCCTG TAAGCATTGA AATGCCGGTA
GCTGCAGGCA TCTATCAGTT GCTGTTGCAG TGGGATGGCA CGTATGCAAT GCATAAGATT
ATGAAACAGT AA
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| Protein sequence | MIKLMNKISW VVISVLCLIH VQTHAQINTP AGATVPFGSN NSYAYGILPT NLPTSGTYGK
GTEVAAKYTA WKSAYIENCG TDKARVKFDN TSETVSEGIA YGMLLAAYAA DQDLFNRLWA
YYKQHRNAKG VMHWKISGCN SVIGQNGATD AELDAAMALI VANYQWPNTT SPHNYKTDAV
SLINAIKNYE INATDFTFEN GDAWKPACRN PSYQAPGYAR VFKLFMAENG QANNTFWDNV
IQKTENLLIN NAHTTSGLST NWCTPAGPPN SSCSGSGTAP DKFGYDACRA PWRQATDYIW
YGPSTILTIT NRQAAFWIGK GGAGSVQGGD GVNHDGSGSG NHNAAFVGPI GALSLATTNT
TANQQFCNAL YSENKNDGLA SGYFTKILQM LGLFVQTGNF WNPYAVSSAT TTSVALTAPT
VTFAAEGDVI TVSATATATT GAISKVDFYA GTTLIGTDNS SPYSISWTPN VSGTVSITAK
ATNTNGDVAT TAPFNVSIYK AVNQTNTAPT IDGVADGVWG GTNTSASLNN VIDGTVANAS
DLSANYKAMW DATYFYVLVN VTDNVKTNNG GTDYYNDDAV EVFFDIGNNK TTTYGANDFQ
YTFRWNDNTI YEKNNKTTGV TFARVDNSTG YVMEMRFPWS TLTGSPAINQ LVGFDVAVND
DDDGNARDRK ISWAATADQA WTNPSYMGTV ILKGAPACTL PSAAGTITGT TTTCANAAGI
TYSIAAVTGA TGYTWTVPAG ATITAGANTT AITVKFGTTA GNISVTPANT CGNGTAATTA
VTLNSLPSAA GSITGITTTC ANAAGITYSI AAVTGATGYN WTVPAGATIT SGTNTRTITV
TFGTTGGNVS VTPTNTCGNG TAASTAVTVN SLPAAAGDIT GVTTTCANTA GVTYSIAAVT
GATGYSWTVP AGATITAGAN TRTITVTFGT AGGNVTVTPT NTCGNGTNKT TAVTVNASGG
NASVSIAASP SSTIYTGQSV TFTATPVNGG TPTYQWKNGS TNIAGATAAT YTTTSLTNGN
AISVTMTSTK QCVANTTANS NTITMTVTAA PAFSSTINGP TVVSPNQSNV TFSVSNQSGM
QYQWTVPPGA TIVSGANTNS IVVNFGTSGG NVTVKETNPS NQTTTITKAI TVSGTTPVYL
PAQEVNISVY PVPCNEQLMI AMGVEASTKV SFSIIDMTGN TIQSGSFEYN SMPVSIEMPV
AAGIYQLLLQ WDGTYAMHKI MKQ
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