| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_3706 |
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| Symbol | prfA |
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| ID | 4184484 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | - |
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| Start bp | 4278452 |
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| End bp | 4279531 |
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| Gene Length | 1080 bp |
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| Protein Length | 359 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638073693 |
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| Product | peptide chain release factor 1 |
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| Protein accession | YP_680282 |
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| Protein GI | 110640072 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0216] Protein chain release factor A |
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| TIGRFAM ID | [TIGR00019] peptide chain release factor 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0488544 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTTGACA AATTAGAGGC TATAAAATCC CGATTTGATG AAGTGGCAGA AGCAATTCTG
GACCCGAATA TTATGTCGGA TATGAAGCGC TATGCCTCCT TAAATAAGGA ATACAAGGAG
CTAAATAAAA TTGTTGAGGT TTACGCTCAA TATAAAAACA TATTGGACAA TATTGAAAGT
TCTAAGAAAG TACTGAGTGT TGAAAAAGAC CCGGACTTTA GAGAAATGGC TAAAGAAGAA
CTTGAAACGT TAGCTGTTCA GAAGGACGAT ATTGAATTGG TTATTAAAGA ACTTCTGATC
CCGAAAGATC CTAACGACAG TAAAAACATT ATCCTTGAAA TCCGAGGTGG AACAGGTGGT
GATGAAGCAT CTATATTTGC AGGTGATATC TTCCGTATGT ATCAGCGTTA TTGTGACCGC
ATGGGCTGGA AGATGGAACT GATCGATGCT ACAGAAGGAA CTTCCGGTGG TTATAAAGAA
ATTATCTGCG GCATCTCCGG TGAAGATGTG TACGGCAAAT TAAAATTTGA ATCCGGTGTA
CACCGCGTAC AGCGTGTACC TGCAACAGAA ACACAAGGAC GGATTCACAC TTCTGCTGCA
TCTGTAGCGG TATTGCCCGA AGTAGAAGAA CTGGATGTTC AGCTTAACAT GAATGATATC
CGTAAAGATA CCTTCTGTTC TTCCGGACCA GGCGGACAAT CCGTTAACAC TACCTATTCT
GCGATCCGTT TAACACACAT TCCTTCAGGT ACGGTTGTTC AATGCCAGGA TGAAAAATCT
CAAATCAAAA ACTTTGAGAA AGCGTTGAAA GTACTTCGTT CCCGTATCTA TGAGATTGAA
TACAAAAAAC AACAGGATGA GTTGGGTAAA GAACGTAACT CAATGATCGG GAGCGGTGAC
CGTTCTGATA AGATCCGCAC ATACAATTAC CCGCAGAGCC GCGTAACCGA TCATCGCATC
GGGCATACGG TTCACAATCT GCCAGCTGTA ATGGATGGTA ATATTGATGA TTTTATTGAA
GAACTCCGAT TGGCAGAAAA TGCCGAGCGT TTAAAAGAAG GCGCTCAGGA AACTGCTTAA
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| Protein sequence | MVDKLEAIKS RFDEVAEAIL DPNIMSDMKR YASLNKEYKE LNKIVEVYAQ YKNILDNIES
SKKVLSVEKD PDFREMAKEE LETLAVQKDD IELVIKELLI PKDPNDSKNI ILEIRGGTGG
DEASIFAGDI FRMYQRYCDR MGWKMELIDA TEGTSGGYKE IICGISGEDV YGKLKFESGV
HRVQRVPATE TQGRIHTSAA SVAVLPEVEE LDVQLNMNDI RKDTFCSSGP GGQSVNTTYS
AIRLTHIPSG TVVQCQDEKS QIKNFEKALK VLRSRIYEIE YKKQQDELGK ERNSMIGSGD
RSDKIRTYNY PQSRVTDHRI GHTVHNLPAV MDGNIDDFIE ELRLAENAER LKEGAQETA
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