| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_3693 |
|---|
| Symbol | asnB |
|---|
| ID | 4186415 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cytophaga hutchinsonii ATCC 33406 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008255 |
|---|
| Strand | - |
|---|
| Start bp | 4265247 |
|---|
| End bp | 4267094 |
|---|
| Gene Length | 1848 bp |
|---|
| Protein Length | 615 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 638073680 |
|---|
| Product | asparagine synthetase B |
|---|
| Protein accession | YP_680269 |
|---|
| Protein GI | 110640059 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0367] Asparagine synthase (glutamine-hydrolyzing) |
|---|
| TIGRFAM ID | [TIGR01536] asparagine synthase (glutamine-hydrolyzing) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.810986 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGTGTGGAA TTAACATCAT AATTGACAAG AAAGGCGTTT TAACAAGCCG CGAGATTCAA
TCCATGAATC AGGCAATATT ATATCGAGGT CCTGACCACT CTGATTTTGT ATCCTTTCAA
TTTAAACAAC AACAAATCTT TATTGGCAAT AACCGATTGA AAATTATTGA TCGGAATACA
CTTTCCAATC AACCGTATAA TTCAATTGAT AAGCGTTATT CGTTAACCTT TAACGGTGCG
ATATATAATT ACAAAGAATT AAAGCAGCAG TTGCCTGCTA TGGAATGGCA AACAGAATCG
GATACAGAAG TTCTGTTAAA CTGGATGATT GTTCATGGTT TATCTGGTCT GCCTGAATTA
AATGGCATGT TTGCCTTTGC CTTTTATGAC CGGCAGCAGC ATGCACTTAT AATTGCCCGT
GATCCGAGCG GCATTAAACC TTTGTACTAT TACAACGATG ATGATTATTT TATTGCATCT
TCTGAGATCA AAGGGATTCT TGCCAGCGGT TTAGTAAAAA AAGAATTTAA TTCGAATCAG
GTAAGCCATT ATTTACAGTT TAAATATGTA CCGAAGCCGT TTACCTTTTA TAAAAATATT
TTTGAACTGA ATGAAGCAAC ATTCATTAAA ATCGATGAAT ATGATTTTAA GATCAAACGC
TTTGAGTCAC CTTCAGTAAT TAAACCCAAT ACACTTACCA ACCAGCAGCT GATAGAAACC
TGTGATCAGC TTATTGAAAA TGCTGTTAAA CATCATCTTG TGGCCGATGT GCCTGTTGGT
TTGTACCTAA GCGGCGGCAT AGATTCAACA CTTCTGCTTT CAAAAATCCG CAAACTCGGG
CATTTAAATT TTCCTACATT CACCATTGCT AACAGTTCAA GGGAACAAGC ATTTGGCACA
CGTGATTTTG AATTTGCGCG TTTAGCTTCT AAGTTGTATA ATTCAGACCA CCACGAAGTT
TCTGTTCATG CAGAAATGCT TCAGGATCTT CCTGCATTTG TATCCATGAT TGATCAGCCT
ATTGGTGATT CAGCATTATT TTTAACACAC ATCTTATCTA AAGAAGCCGG ACAGCATGTG
CGTGTTGCAT TGAATGGTGC AGGTGCAGAC GAGCTCTTTG CTGGGTATAA CAGACACAGT
GCATATAAAA GTTACCTGAA TAATCTGCTG CATAAAAATC TTGCGATAAC CCTTATTAAA
AGCACCTACA ACATTTTGCC GGATGGCGGC AACCATTCGC TTAAAAAAGT ATTCAGGCTT
TGGAATAAAT TCACGGGCAT GATGGATGTT GATCCAATCA AAACGTGTCA CAATTTTTCG
TCTTCAGAAT ATTTCATTGA AAAAAATACT TCTATAGAGG TTGATGATAA GTCGTATGAA
GACCTTTCTT ACTATTTGTA TTACTGCTTG CGGAACGACC GGACCAAATA TCTGATCTCG
GACATCCTTG CATTAACAGA TAAGATGACC ATGCGTTCTT CTATTGAAGC GCGTGTCCCT
TACCTGGACC AGGAACTACG AAGGTTTGTA GAAAGTTTAG ACCCTTCTGT CTTATTAAAG
AACGGACGGA AGTGGATTCT TAAAGAAGTG CTGTTGCGTA ACGGAGGAGA AACTTTTTTA
AACCGTCCGA AAGAAGGTTT TGGAATGCCA TTTGGTTATT GGCTAAAGCT GCCGGTTAAT
AAAAATTTTG TTGAAAAGCT GACTAATAAA AATCACCCGA TCTATGAATG GGTCCCTTAT
CAAACCATCA AAAATCTTGT TGACTGGCAT TTGGGCAGTA AGCGCGACTG TTCTTCTGAA
TTGTGGTCAG TACTTTTATT GATGCATTGG TATGAAAAAG AATTCTGA
|
|---|
| Protein sequence | MCGINIIIDK KGVLTSREIQ SMNQAILYRG PDHSDFVSFQ FKQQQIFIGN NRLKIIDRNT
LSNQPYNSID KRYSLTFNGA IYNYKELKQQ LPAMEWQTES DTEVLLNWMI VHGLSGLPEL
NGMFAFAFYD RQQHALIIAR DPSGIKPLYY YNDDDYFIAS SEIKGILASG LVKKEFNSNQ
VSHYLQFKYV PKPFTFYKNI FELNEATFIK IDEYDFKIKR FESPSVIKPN TLTNQQLIET
CDQLIENAVK HHLVADVPVG LYLSGGIDST LLLSKIRKLG HLNFPTFTIA NSSREQAFGT
RDFEFARLAS KLYNSDHHEV SVHAEMLQDL PAFVSMIDQP IGDSALFLTH ILSKEAGQHV
RVALNGAGAD ELFAGYNRHS AYKSYLNNLL HKNLAITLIK STYNILPDGG NHSLKKVFRL
WNKFTGMMDV DPIKTCHNFS SSEYFIEKNT SIEVDDKSYE DLSYYLYYCL RNDRTKYLIS
DILALTDKMT MRSSIEARVP YLDQELRRFV ESLDPSVLLK NGRKWILKEV LLRNGGETFL
NRPKEGFGMP FGYWLKLPVN KNFVEKLTNK NHPIYEWVPY QTIKNLVDWH LGSKRDCSSE
LWSVLLLMHW YEKEF
|
|---|
| |