| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_3685 |
|---|
| Symbol | ssb |
|---|
| ID | 4186407 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cytophaga hutchinsonii ATCC 33406 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008255 |
|---|
| Strand | - |
|---|
| Start bp | 4257461 |
|---|
| End bp | 4257919 |
|---|
| Gene Length | 459 bp |
|---|
| Protein Length | 152 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 638073672 |
|---|
| Product | single-stranded DNA binding protein |
|---|
| Protein accession | YP_680261 |
|---|
| Protein GI | 110640051 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0629] Single-stranded DNA-binding protein |
|---|
| TIGRFAM ID | [TIGR00621] single stranded DNA-binding protein (ssb) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 0.283411 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGGAA TTAACAAAGT AATTCTAGTA GGGAATCTTG GTAAAGATCC CGAAGTGCGT
GCTATCGGCA CCGACAGAAA AGTGGCAAAT TTTTCGCTTG CTACAACTGA ATCTTACAAA
AACAAAAGCG GAGAGCGCGT TGACCAGACT GAATGGCACA ACGTAGTTTT TTATGGTCCC
GTTGCAGACG TAATTGAACG TTACCTTCGT AAGGGTAGCC AGATTTACGT TGAAGGAAAA
ATTCGTACAC GTTCGTACGA CGATAAAGAT GGTGTAAAAA AATACATCAC TGAAATCATT
GGAGATACCA TGACAATGCT GGGTGCAAAA TCAGGAGGTT CTGATTCACC AAATGGTAAT
GGTAATATGT CATCATCATC TTCATCTGCA TCTGTTGCAA TGGAGAGTGC AGGATCTTTT
GAGCCACAAA CAAGTGGCGC AGACGATTTA CCTTTCTAA
|
|---|
| Protein sequence | MAGINKVILV GNLGKDPEVR AIGTDRKVAN FSLATTESYK NKSGERVDQT EWHNVVFYGP
VADVIERYLR KGSQIYVEGK IRTRSYDDKD GVKKYITEII GDTMTMLGAK SGGSDSPNGN
GNMSSSSSSA SVAMESAGSF EPQTSGADDL PF
|
|---|
| |