Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_3684 |
Symbol | |
ID | 4184657 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | - |
Start bp | 4256400 |
End bp | 4257281 |
Gene Length | 882 bp |
Protein Length | 293 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 638073671 |
Product | hemolysin-like protein |
Protein accession | YP_680260 |
Protein GI | 110640050 |
COG category | [R] General function prediction only |
COG ID | [COG1253] Hemolysins and related proteins containing CBS domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.335201 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGAAG GGAGTAAACA GAATAAAAAG TCTACGGATG CGTTTTCAAA ATACATGCGT AAGCTTTTTG GTATTCAAGA AATTACAGAA AGTCAGCGTG AGTACATTGA AAAATTAGAG CGCGAACTGG AATCTGCTAA AGGCACGCTC AGTACGCGTG AAGAAAAGGA AATGATCCGT GGTCTGGTTA AATTTGGTAA TATCATGGTT AAGCAAATCA TGTGTCCGCG CATGGATATG GCTGCCGTTG ATATAGCACT GAATTACGAG CAGCTGCAGG AATATATCAG TACCTGTGGT TTTTCCCGAA TTCCTGTTTA TAAAGAATCT GCTGATAAAA TTGAAGGCGT TTTAAATATT AAAGATCTGT TTCCGTTTTA TAACAAGGAA AAAGATTTTA ACTGGCAACA GCTGATCCGT ACTGTTGAAT TTATTCCTGA AACTAAACTG ATCGAAGAAT TGCTTCGTGA ATTTCAATTG AAGCATTTGC ATATGGCTAT TGTAGTAGAT GAATATGGCG GTACTGCCGG ATTGATCACC ATGGAAGATG TTATTGAAGA AATTGTCGGC GACATTCATG ATGAATATGA CGATGATGAA AAACCCTATG CGCAACTAAG CGATACCAGT TATTTGTTTG AAGGAAAAAT TTCGCTGGTG GATTTTTATA AAGCAATTGA GCTGGATAAA GATATATTTG ACGAAGTAAA AGGTGAAAGC GAAACACTTG GAGGCTTGCT GCTGAACATC AACTCAGATC TCCCGCGCCT TGGCGATGAA ATCATTTATG AAGGATATGT TTTTAAAATC GATGCCGTTA ACAGCAAACG TATTCTTCGG GTAAAAGTAA CAGTTCCAGA AAATTCAGAA AATGAAAAAT AA
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Protein sequence | MSEGSKQNKK STDAFSKYMR KLFGIQEITE SQREYIEKLE RELESAKGTL STREEKEMIR GLVKFGNIMV KQIMCPRMDM AAVDIALNYE QLQEYISTCG FSRIPVYKES ADKIEGVLNI KDLFPFYNKE KDFNWQQLIR TVEFIPETKL IEELLREFQL KHLHMAIVVD EYGGTAGLIT MEDVIEEIVG DIHDEYDDDE KPYAQLSDTS YLFEGKISLV DFYKAIELDK DIFDEVKGES ETLGGLLLNI NSDLPRLGDE IIYEGYVFKI DAVNSKRILR VKVTVPENSE NEK
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