Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_3664 |
Symbol | fumC |
ID | 4184325 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | + |
Start bp | 4231905 |
End bp | 4233293 |
Gene Length | 1389 bp |
Protein Length | 462 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 638073652 |
Product | fumarate hydratase |
Protein accession | YP_680241 |
Protein GI | 110640030 |
COG category | [C] Energy production and conversion |
COG ID | [COG0114] Fumarase |
TIGRFAM ID | [TIGR00979] fumarate hydratase, class II |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTATTC GAATTGAAAA AGATACCATG GGTTTGGTGG AAGTGCCGGC AGATAAATAT TGGGGTGCAC AAACCCAACG TTCCATAGAA AATTTTAAAA TCGGTGATGC TTCAACGCGC ATGCCGATCG AAATCATACA CGCCTTCGCT ATCTTAAAAA AGGCAGCTGC ACAAACAAAT CTCGAATTAG GGATTTTAGA TAAAGAAAAA GCAGGCAGTA TCGCAGAAGT CTGCGATGAA ATTCTGGCAA AAAAACTGGA TGATCAATTT CCGTTGGTTG TATGGCAAAC AGGTTCGGGT ACACAATCAA ATATGAATGT GAATGAAGTG ATTGCAAACC GTGCACATGT TTTGCTTGGC GGAAATTTAC TGGATGAAAC AAAAAAAATT CATCCAAATG ATGATGTAAA TAAATCGCAG TCATCAAACG ACACGTTTCC CACGGCTATG CACATTGCCG CTTGCCTGAT GTTAAAAAAA GTAACGATTC CAGGAATAGA GCAATTGCAG CATACGTTAC GGACAAAAAC AGAACAGTTT AAAGATGTTG TTAAAATAGG CCGTACGCAT TTCATGGATG CAACGCCTTT GACATTGGGC CAGGAGTTTT CCGGATATGC TGCGCAATTA AGCTATGCAT TAAAAGCAAT TCACAATGCC TCGGCACATC TTTCAGAACT AGCGCTGGGT GGAACAGCTG TTGGTACGGG AATTAATGCA CCCAAAGGAT ATGCGGAACG GGTTGCCGGG CACATTGCTG CGCTCACAGG TTTTCCGTTT ACATCAGCAC CCAATAAATT TGAAGCACTT GCTACACACG ACGCATTGGT AGAAATGCAC GGCGCGTTAA AAACGTCTGC AGTGAGTCTG ATGAAAATTG CAAATGACAT TCGCATGCTT GCATCCGGTC CCAGAAGCGG GATTGGAGAA ATCCACATTC CGGATAATGA ACCCGGATCT TCAATCATGC CGGGCAAGGT GAATCCTACA CAGGTAGAAG CCTTGACGAT GGTTTGCGCG CAGGTAATGG GAAATGATGT AACATTGTCC GTTGCAGGTT CTATGGGACA GTTTGAATTG AATGTGTTCA AACCGGTGAT TATTTATAAT TTTCTGCAAT CTGCACGGCT GATCGGTGAT GCATGTGTTT CATTTAATGA AAAATGTGCA AAAGGAATAG AGCCTAATAC AGCCACCATT GAACGCAATG TAGAAAACTC GTTGATGCTG GTTACAGCCT TAAATCCGCA TATTGGTTAT GATAAGTCTG CAGAAATTGC AAAACATGCG CATAAAGAAA ACACAAGTCT CCGGCAGGCT GCATTAGCAT TAGGCTATGT TACCAACGAA CAGTTTGATG CCTGGGTAAA TCCTAAAAAT ATGATCTAG
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Protein sequence | MSIRIEKDTM GLVEVPADKY WGAQTQRSIE NFKIGDASTR MPIEIIHAFA ILKKAAAQTN LELGILDKEK AGSIAEVCDE ILAKKLDDQF PLVVWQTGSG TQSNMNVNEV IANRAHVLLG GNLLDETKKI HPNDDVNKSQ SSNDTFPTAM HIAACLMLKK VTIPGIEQLQ HTLRTKTEQF KDVVKIGRTH FMDATPLTLG QEFSGYAAQL SYALKAIHNA SAHLSELALG GTAVGTGINA PKGYAERVAG HIAALTGFPF TSAPNKFEAL ATHDALVEMH GALKTSAVSL MKIANDIRML ASGPRSGIGE IHIPDNEPGS SIMPGKVNPT QVEALTMVCA QVMGNDVTLS VAGSMGQFEL NVFKPVIIYN FLQSARLIGD ACVSFNEKCA KGIEPNTATI ERNVENSLML VTALNPHIGY DKSAEIAKHA HKENTSLRQA ALALGYVTNE QFDAWVNPKN MI
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