Gene CHU_3664 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_3664 
SymbolfumC 
ID4184325 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp4231905 
End bp4233293 
Gene Length1389 bp 
Protein Length462 aa 
Translation table11 
GC content43% 
IMG OID638073652 
Productfumarate hydratase 
Protein accessionYP_680241 
Protein GI110640030 
COG category[C] Energy production and conversion 
COG ID[COG0114] Fumarase 
TIGRFAM ID[TIGR00979] fumarate hydratase, class II 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTATTC GAATTGAAAA AGATACCATG GGTTTGGTGG AAGTGCCGGC AGATAAATAT 
TGGGGTGCAC AAACCCAACG TTCCATAGAA AATTTTAAAA TCGGTGATGC TTCAACGCGC
ATGCCGATCG AAATCATACA CGCCTTCGCT ATCTTAAAAA AGGCAGCTGC ACAAACAAAT
CTCGAATTAG GGATTTTAGA TAAAGAAAAA GCAGGCAGTA TCGCAGAAGT CTGCGATGAA
ATTCTGGCAA AAAAACTGGA TGATCAATTT CCGTTGGTTG TATGGCAAAC AGGTTCGGGT
ACACAATCAA ATATGAATGT GAATGAAGTG ATTGCAAACC GTGCACATGT TTTGCTTGGC
GGAAATTTAC TGGATGAAAC AAAAAAAATT CATCCAAATG ATGATGTAAA TAAATCGCAG
TCATCAAACG ACACGTTTCC CACGGCTATG CACATTGCCG CTTGCCTGAT GTTAAAAAAA
GTAACGATTC CAGGAATAGA GCAATTGCAG CATACGTTAC GGACAAAAAC AGAACAGTTT
AAAGATGTTG TTAAAATAGG CCGTACGCAT TTCATGGATG CAACGCCTTT GACATTGGGC
CAGGAGTTTT CCGGATATGC TGCGCAATTA AGCTATGCAT TAAAAGCAAT TCACAATGCC
TCGGCACATC TTTCAGAACT AGCGCTGGGT GGAACAGCTG TTGGTACGGG AATTAATGCA
CCCAAAGGAT ATGCGGAACG GGTTGCCGGG CACATTGCTG CGCTCACAGG TTTTCCGTTT
ACATCAGCAC CCAATAAATT TGAAGCACTT GCTACACACG ACGCATTGGT AGAAATGCAC
GGCGCGTTAA AAACGTCTGC AGTGAGTCTG ATGAAAATTG CAAATGACAT TCGCATGCTT
GCATCCGGTC CCAGAAGCGG GATTGGAGAA ATCCACATTC CGGATAATGA ACCCGGATCT
TCAATCATGC CGGGCAAGGT GAATCCTACA CAGGTAGAAG CCTTGACGAT GGTTTGCGCG
CAGGTAATGG GAAATGATGT AACATTGTCC GTTGCAGGTT CTATGGGACA GTTTGAATTG
AATGTGTTCA AACCGGTGAT TATTTATAAT TTTCTGCAAT CTGCACGGCT GATCGGTGAT
GCATGTGTTT CATTTAATGA AAAATGTGCA AAAGGAATAG AGCCTAATAC AGCCACCATT
GAACGCAATG TAGAAAACTC GTTGATGCTG GTTACAGCCT TAAATCCGCA TATTGGTTAT
GATAAGTCTG CAGAAATTGC AAAACATGCG CATAAAGAAA ACACAAGTCT CCGGCAGGCT
GCATTAGCAT TAGGCTATGT TACCAACGAA CAGTTTGATG CCTGGGTAAA TCCTAAAAAT
ATGATCTAG
 
Protein sequence
MSIRIEKDTM GLVEVPADKY WGAQTQRSIE NFKIGDASTR MPIEIIHAFA ILKKAAAQTN 
LELGILDKEK AGSIAEVCDE ILAKKLDDQF PLVVWQTGSG TQSNMNVNEV IANRAHVLLG
GNLLDETKKI HPNDDVNKSQ SSNDTFPTAM HIAACLMLKK VTIPGIEQLQ HTLRTKTEQF
KDVVKIGRTH FMDATPLTLG QEFSGYAAQL SYALKAIHNA SAHLSELALG GTAVGTGINA
PKGYAERVAG HIAALTGFPF TSAPNKFEAL ATHDALVEMH GALKTSAVSL MKIANDIRML
ASGPRSGIGE IHIPDNEPGS SIMPGKVNPT QVEALTMVCA QVMGNDVTLS VAGSMGQFEL
NVFKPVIIYN FLQSARLIGD ACVSFNEKCA KGIEPNTATI ERNVENSLML VTALNPHIGY
DKSAEIAKHA HKENTSLRQA ALALGYVTNE QFDAWVNPKN MI