| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_3660 |
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| Symbol | |
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| ID | 4184321 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | - |
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| Start bp | 4225605 |
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| End bp | 4228898 |
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| Gene Length | 3294 bp |
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| Protein Length | 1097 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638073647 |
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| Product | WD repeat-containing protein |
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| Protein accession | YP_680236 |
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| Protein GI | 110640026 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2319] FOG: WD40 repeat |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCAGGTAT ATATTCCGGA CAAACCATAT GAAATCTTTT CTTTAACTTA CTGCTTTGAA
ACCATATACA ACATGAAACA ACGTACGTTT GTCTTATTAT TTTTTATTCT GACTTTAAGT
AGTTACGCCC AAACATTGAA GCTTGAGACT GTGATTCAAA AAGGTCACTC CGCCTCGGTG
AAAGCTGTTG CCGTAAGCCC TGACGGCAAA ATACTGGCTA CAGGCAGCCG GGATAAAAGT
GTAAAATTAT GGGATCAGCA ATCCGGTATG GAGATACGCA GTCTGATCGG CCATGACCAT
ACCGTAAACG GCTTGGCATT CAGTCCAGAT GGAAAACTGC TCGCAACCAG CAGTGCAGAC
GGCACAGCGC GCGTGTGGGA CATTTTAACA GGAAAAGAAA TTTTCACCTC TCCGAAAAAT
TCGAAATACA TTACCGATGT CGCCTTCAAT CCCGATGGCA AATCTTTTGC ATATGCCGGC
TATCCGGACT CTGCATCGAT TTATGCGATA CCCTCGGGGA AATTAATTAA ACGCCTGGAA
GTAAATGCAG ATCAGGGATC AGGATATGGC ATCAGCCTGA AGTATAGCAA TGATGGTAAA
TGGCTGGCTA TTGGTGAAGA CAATAAAACA GCAAATGTAT ATCGTACAAG TGACTGGCAT
CTGGCATACA CCTTTAAACC CGCTGAAGGC TGGTGCGGTG GCTGTGGAAC GTATGTTGAA
TTTTCGCGTG ATAATAAATC ACTTTTTAAA ATCGCGCATA ACGATAAATT ATCACAATAT
GATTTGCAAA CAGGCAGTCT GATCAAAACC TTCGGCGAGC CCGTTGATTA TTTACGTGGC
ATAACCCTTA CAAAAGACGG CCAGCATGTG ATTGCCGCCA GTGACAGTAT GTTGTATAAT
TATACCATTA CGTCAAAAAC TGTTGTTGCC TACAAACTTT ATTTATCTGA AACGGTAAAT
GATATTGCGC TTTCATTGGA TGAAAAAGAA ATTCTTGTTG CCTCTGATAA TATGACTGCG
TGGGCACTTG AGGCCGCTAG CGGAAAAGTG ATCCGTACCT ATCAGGGGGC GTTGCAGGAG
CAGGATAAAG GCGGGCTTAA CTATAATGCA GACAATTACT GGGAATATAA TATTGCGCGT
TATCTTCGAC TTAAAAATGA ATTGCTGCTG ACAAAAGATG ACAATAATTT TATAACAGGC
AAAACCGGGG TAAATGCCAT TCAATGGAAT ATCTCAACCG GGGCTCCGAA TAAATTATAC
GAAGGACATA CTAAAGCGGT GATCAGCATG GATCAATCGG CTGATGGCAG CATATTAGCC
ACAGCAGACG GTGCGGGTGA AGTATTTCTT TGGAACACAA AAACAGGCGC GCTGATCAAT
CGCATTAAAC CACATACCGA ACCTATTTTT GATGTGTCGT TGAGCAGAGA TGGAAAATAT
GTAGCAACCG GTTCGTGGGA TGCAAGCATT GAAGTGTATG ATGTTCAGAC GGGAGAAGTA
AGCTCAGATA TGTATCTGAA AGAAAATTCC TGCTATAGCA TTTCCTTTAC TCCCAACGGA
CTGTACCTGC TTTGCGGCAG ATTAGATAAA TCACTGGAAT TGCGTGAACC GGATTCTAAA
AAAGTTGTGC TTTCGTTTAT AGGTCACACC GATGTTGTTT CATCTATTGC GTTCGGAGCA
GATCCGAATA AGGCACTCAC TGCCTCATGG GATGGAACCG CGCGCATCTG GGATGTAACT
ACAGGCATGA TGCTGCAAAA ATTTAAGGGA GCCAGGGGTA TGTTGCACAG CGCAATTTAT
TCCACAGACA GTAAAAAAAT TATTACCGGA GGGGATGACC GTATCATCCG CATCTGGGAT
ATACAATCCG GCCAAGTATT AAAGACCTTA AACGGTCATC AGTCTGAGAT TACTTCTTTG
TCTTTAAGCA AAGATGGAAA GATGCTTGTT TCATACAGCA CAGATGGTGT TGTTAAATTC
TGGAATTTAG AGTCGGGACT GGAATTTTAT GAGCATGTTC ACATCAGTTC AAGAGAGTGG
ATGGCCCGAA CGCCCCAAGG TTACTTCAGT GCAACAGAAC AGGCGCGTGC AGATATTCAT
TTTGTGAAAG GAATGGATGT GTACGCTCCG GATCAGTTTT TCGAATACTA CAGACCAGAT
CTTATTCAGC AGATTTTTCT TAACAGAGGT TCTTCACCTA CCGGTATGCA AAATGTAGAA
AACAGTTTGC AACTCTCACC TCCACCACTG ATTAAGCTCG CATGCATACC CAATGCAGAT
GGTTTGCAGG CAACCTTAAA TATTAAAGTG ATGGATGAAG GCGGTGGCCT GAGCGAAATT
CGTTTGGCGC ATAATGGCAA AAATATGGCT GTAGCATTAG ACCCTAAAAA GGTCGTAGAA
GGAAAAGGCA ATTCATATAT TTATTCCGTT CCTGTATCAT TGGTTCGCGG AACAAATCAG
TTTAGCGGCA TTGCGGTGAG TAAGGGCAAA ATTGAATCCG CTGCATCGCT TGTTTCGGTT
GTTTCTGATA AAGCACCCAG TGCTGCCGTT TGTCATGTAT TTGCCATCGG AATTGATACC
TATAAAAATC CTGCATATAC ATTAAACTAC GCCCGTGAAG ATGCTGAAGC ATTTGCAGAA
TCAGTGAAAA GAAACGGAGC TAATCTATAC CAGAAAGTAA TTGTACATGG GTTGTATGAT
GCTGCCGCCA CCAGACAAAA CGTTTTAGAT ACACTAAAAA GTCTTGAAGC GCATATCGCT
CTAAATGACG TTTTTATTTT TTATTACGCC GGACATGGCA GCATGGTAGA TCAGAATTTT
TATTTTATTC CTACTGAATG CACAAGTATG TATCAGGCAA CTGCAAACAA TGCGTTATCA
GCTGAAACAA TACAGGCAGG GTTTAAAAAT ATAAAAGCAT TGAAACAGAT TATTATTATG
GATGCCTGCC AGTCAGGAGG GTCGGTTGAG GTGTTAGCCA TGCGCGGAGC AAATGAAGAA
AAAGCCTTTG CACAACTTTC AAGAGGCGCA GGTATTCACG TAATGGCTTC TGCAGGAAGC
GAGCAAAACG CAAAAGAAAT CCTGGAATTA AAACATGGTT TGTTCACCTA TGTATTACTG
GAAGCCCTGA ACGGCAAAGC AGATGGTGCA CCAAAAGATG GTAAAATTAC TATTTATGAA
TTAAAATCGT ATCTGGATGA TCAGGTGCCG GAGCTAAATT CAAAGTATAG CGGGAAGATT
CAGTTCCCAT ACACTTTTTC AAGAGGAAGC GATTTTCCAA TTGTACTGGA GTAG
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| Protein sequence | MQVYIPDKPY EIFSLTYCFE TIYNMKQRTF VLLFFILTLS SYAQTLKLET VIQKGHSASV
KAVAVSPDGK ILATGSRDKS VKLWDQQSGM EIRSLIGHDH TVNGLAFSPD GKLLATSSAD
GTARVWDILT GKEIFTSPKN SKYITDVAFN PDGKSFAYAG YPDSASIYAI PSGKLIKRLE
VNADQGSGYG ISLKYSNDGK WLAIGEDNKT ANVYRTSDWH LAYTFKPAEG WCGGCGTYVE
FSRDNKSLFK IAHNDKLSQY DLQTGSLIKT FGEPVDYLRG ITLTKDGQHV IAASDSMLYN
YTITSKTVVA YKLYLSETVN DIALSLDEKE ILVASDNMTA WALEAASGKV IRTYQGALQE
QDKGGLNYNA DNYWEYNIAR YLRLKNELLL TKDDNNFITG KTGVNAIQWN ISTGAPNKLY
EGHTKAVISM DQSADGSILA TADGAGEVFL WNTKTGALIN RIKPHTEPIF DVSLSRDGKY
VATGSWDASI EVYDVQTGEV SSDMYLKENS CYSISFTPNG LYLLCGRLDK SLELREPDSK
KVVLSFIGHT DVVSSIAFGA DPNKALTASW DGTARIWDVT TGMMLQKFKG ARGMLHSAIY
STDSKKIITG GDDRIIRIWD IQSGQVLKTL NGHQSEITSL SLSKDGKMLV SYSTDGVVKF
WNLESGLEFY EHVHISSREW MARTPQGYFS ATEQARADIH FVKGMDVYAP DQFFEYYRPD
LIQQIFLNRG SSPTGMQNVE NSLQLSPPPL IKLACIPNAD GLQATLNIKV MDEGGGLSEI
RLAHNGKNMA VALDPKKVVE GKGNSYIYSV PVSLVRGTNQ FSGIAVSKGK IESAASLVSV
VSDKAPSAAV CHVFAIGIDT YKNPAYTLNY AREDAEAFAE SVKRNGANLY QKVIVHGLYD
AAATRQNVLD TLKSLEAHIA LNDVFIFYYA GHGSMVDQNF YFIPTECTSM YQATANNALS
AETIQAGFKN IKALKQIIIM DACQSGGSVE VLAMRGANEE KAFAQLSRGA GIHVMASAGS
EQNAKEILEL KHGLFTYVLL EALNGKADGA PKDGKITIYE LKSYLDDQVP ELNSKYSGKI
QFPYTFSRGS DFPIVLE
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