| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_3657 |
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| Symbol | polA |
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| ID | 4184318 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | - |
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| Start bp | 4221386 |
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| End bp | 4224226 |
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| Gene Length | 2841 bp |
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| Protein Length | 946 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 638073644 |
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| Product | DNA polymerase I |
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| Protein accession | YP_680233 |
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| Protein GI | 110640023 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0258] 5'-3' exonuclease (including N-terminal domain of PolI)
[COG0749] DNA polymerase I - 3'-5' exonuclease and polymerase domains |
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| TIGRFAM ID | [TIGR00593] DNA polymerase I |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAAT TGTTTTTGTT GGATGCCATG GCACTAATAT ACCGTGCCCA CTTTGCTTTT
AGTAAAAACC CAAGAGTAAC GTCTACGGGT ATTAGTACCG GCGCGGTTTT TGGCTTCACA
AATAGTCTGT TAGAAATTCT ACTTAAAGAA AAACCTACTC ATATTGGTGT TGCTTTTGAT
TTACAGGGTC CCACATTCAG ACATGATAAT TTTACAGAAT ACAAAGCTAA CCGCCAGGAA
CAGCCCGAAG ATATAAGCGT TGCCATTCCC TACATTTATC GCCTGCTGGA AGGGATGAAT
ATTCCAATAC TTGGTGTTCC CGGGTATGAG GCGGATGATA TTGTAGGAAC ATTTTCTAAA
ATCGCACCCC CGCTTGGTTT TGATGTGTAC ATGATGACCA TGGATAAAGA TTACATGCAG
CTGGTAAATG AGCATGTATT TTTATACCGT CCGGCATATA TGGGTAATGA TGTTGAAATT
TATGACATTA ATAAAGTATT GGCGAAGTTT AATATCAAGG AAGTAGATCA GGTGCGTGAT
ATTCTTGGTC TGCAAGGCGA TACCGTTGAT AATATTCCAG GCATTCCAGG CATTGGTGAA
AAGACTGCGC AAAAACTTAT TGCAGATTTT GGCTCGGTAG AAAATCTGAT CAAAAATGCA
GATCAGCTTA AAGGCAAGCA AAAAGAAAAT GTAATAAACT TTGCTGCTCA AGGTTTACTG
TCTAAAGAGC TTGCTACCAT ACATTGCGAA GTACCGATTG AATTTGATGA AGAAGCTTTG
CGTGTTAAAG AATATAATAT TGAAGCCTTG GATCAATTGT TTGATGAACT TGAATTCAGG
ACGCTTAAAA AAAGATTGTT CGGCAACTCC TCTTCTGCAT CTGAAACAGA AAAGAAAATG
GAAACAAAAG CGACCAAAAA ATCTGCTGCT GTTTCATCAA CCGGACAAAT GGGGCTCTTT
GGCATGGAGG CTGCCGAGAC TATTACTGAA GAATTTGACG AGAAGGGGGA GTCAAAGGAA
ACTATTGTGA GAGACACAAT TGATACAGTC CTTCACGATT ATTATGTGGT AGATACCGAA
GCTGAGATTG TCCGTTTAAC CAATCTTCTG TTGCTGCAGG AGTCTTTTTG TTTTGATACA
GAAACTACCT CTCTTAACGC ACTTGAAGCA GAACTTGTCG GGCTTGCTAT TTCCTTCCGT
GCCAAAGAAG CGTATTATAT ACCATTTACG TCTGATCAGA TTCAGACACA ACGTATCCTT
GACCTTCTGC AGCCGGCTTT TGAAAAGTCA TCCATTACAA AAGTCGGCCA GAATTTGAAA
TACGACCTGT TGGTTTTGAA AAAATATAAT TTTGCCATAG CTGGTCCGTT GTTTGATACA
ATGCTTGCGC ACTATTTGCT TGAGCCTGAA ATGCGCCACG GCATGGATAC ACTTGCTGAA
GTCTATTTAA ATTATACACC CGTTTCCATT GAGCAGCTTA TCGGGAAAAA AGGTGCAAAG
CAAGGCACCA TGCGTGATGT TGAAATTGAA GCAATAAAAG AATATGCGGC AGAAGATGCA
GACATTACTT TTCAGCTTTA TAAATTTTTC AGCCCGCTTG TTAAAGATCA AAATCTTAAT
CCATTGTTCA ATGAAGTGGA AATGCCGTTA AGCGAAGTGC TTGCAGATAT GGAATTGGAA
GGTGTTAAAA TTGACACGCA AGCATTGTCC GAATTTTCAT CGCTGTTGCA GACAGAGATT
ACTGCCGTTG AAAAAGAAAT CTATGAACAT GCGGGTGTAC AGTTTAATAT TTCTTCTCCG
AAACAATTAG GTGAAATACT CTTTGATAAA TTAAAGCTCG ACCCGAACGC GAAGAAAACG
AAGACAGGTC AATATGCAAC AGGTGAAGAT GTACTTACAA AACTGGATAG TGACCACCCT
ATTTTGGCAA ACATTTTAGA TTACAGAGAA TTTCAAAAAC TTAAATCAAC CTATGTAGAT
GCACTTCCTC TTTTATTGGG AAAAGATGGA CGCGTGCATA CATCCTTTAA CCAGGCTGTT
GCTGCCACTG GCAGATTAAG CTCAACCAAT CCGAACCTGC AAAATATTCC TATCCGTACA
GACAGAGGCA AAGAAATCAG AAGAGCATTT GTTGCACGCG ACAACGACCA TGTTATCTTG
TCGGCCGATT ATTCTCAAAT CGAATTGCGT ATTATGGCTG CTTTCAGCAA AGATGAAAGT
ATGCTGAACG CTTTTAGAAA AGGCGTTGAC ATTCATAGCA CAACCGCAAG CAAAGTTTTC
AAAGTTCCTA TTGAAGACGT TACTGCTGAT ATGCGACGCA AAGCAAAGAT GGTCAACTTC
GGAATTATTT ATGGTATTAG TGCTTTTGGT TTATCACAAC GTTTATCGAT ACCCCGGAAA
GAAGCGGCAG AAATAATCAC CGCTTATTTT ACAGAATTTC CGGCTGTTAA AGCTTATATG
GATGCCTGTG TTAACTCTGC ACGCGAAGTT GAATATGTTG AAACGATTTT AGGCAGAAGA
AGATTCTTGC GCGACATTAA CTCCCGCAAC ATGACCATGC GTGGGTTTGC CGAACGAAAT
GCAATCAATG CTCCGATTCA GGGAAGTGCT GCTGATATGA TCAAAGTAGC CATGATCCGC
ATTCATGACT GGATGAAAAA AGAAAACCTG AAATCCAAAA TGGTTCTTCA GGTGCATGAT
GAATTACTGT TCGATGCACA CAAAGACGAA ATTGACCTGT TAAAAACCCA GGTAGAAATT
TTTATGAAAG AAGCAATTGC CTTAGATGTT CCTATGGAAG TCGGAATGGG AATTGGTGAA
AATTGGCTTG AAGCACACTA A
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| Protein sequence | MKKLFLLDAM ALIYRAHFAF SKNPRVTSTG ISTGAVFGFT NSLLEILLKE KPTHIGVAFD
LQGPTFRHDN FTEYKANRQE QPEDISVAIP YIYRLLEGMN IPILGVPGYE ADDIVGTFSK
IAPPLGFDVY MMTMDKDYMQ LVNEHVFLYR PAYMGNDVEI YDINKVLAKF NIKEVDQVRD
ILGLQGDTVD NIPGIPGIGE KTAQKLIADF GSVENLIKNA DQLKGKQKEN VINFAAQGLL
SKELATIHCE VPIEFDEEAL RVKEYNIEAL DQLFDELEFR TLKKRLFGNS SSASETEKKM
ETKATKKSAA VSSTGQMGLF GMEAAETITE EFDEKGESKE TIVRDTIDTV LHDYYVVDTE
AEIVRLTNLL LLQESFCFDT ETTSLNALEA ELVGLAISFR AKEAYYIPFT SDQIQTQRIL
DLLQPAFEKS SITKVGQNLK YDLLVLKKYN FAIAGPLFDT MLAHYLLEPE MRHGMDTLAE
VYLNYTPVSI EQLIGKKGAK QGTMRDVEIE AIKEYAAEDA DITFQLYKFF SPLVKDQNLN
PLFNEVEMPL SEVLADMELE GVKIDTQALS EFSSLLQTEI TAVEKEIYEH AGVQFNISSP
KQLGEILFDK LKLDPNAKKT KTGQYATGED VLTKLDSDHP ILANILDYRE FQKLKSTYVD
ALPLLLGKDG RVHTSFNQAV AATGRLSSTN PNLQNIPIRT DRGKEIRRAF VARDNDHVIL
SADYSQIELR IMAAFSKDES MLNAFRKGVD IHSTTASKVF KVPIEDVTAD MRRKAKMVNF
GIIYGISAFG LSQRLSIPRK EAAEIITAYF TEFPAVKAYM DACVNSAREV EYVETILGRR
RFLRDINSRN MTMRGFAERN AINAPIQGSA ADMIKVAMIR IHDWMKKENL KSKMVLQVHD
ELLFDAHKDE IDLLKTQVEI FMKEAIALDV PMEVGMGIGE NWLEAH
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