Gene CHU_3641 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_3641 
Symbol 
ID4184885 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp4195513 
End bp4196382 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content44% 
IMG OID638073628 
Producthypothetical protein 
Protein accessionYP_680217 
Protein GI110640007 
COG category[S] Function unknown 
COG ID[COG3384] Uncharacterized conserved protein 
TIGRFAM ID[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence 


Plasmid Coverage information

Num covering plasmid clones49 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACGGA GAAAATTCAT TAAAAACGCC GCGCTTGCCG GTACCGCAAT GATTGGTTTA 
CATCAATTTG CCCGAGCCTG GGACAATGAG CCCAAGGTTA ATGGGATTAT GCCTGTATTG
TTTGTTGGTC ATGGAAGTCC AATGAATGCT ATTGAACAGA ATAAATTTAA TGCAACCTGG
AAAGAGTTAG CAGCTAAATT ACCAACGCCC AAAGCGATCA TGGTTGTTTC GGCACATTGG
GAAACTGTAG GTACAAAAGT TACTGCCATG CCTAACCCGG CAACCATACA TGACTTCGGA
GGCTTCCCCA GGGAATTGCA TGAAGCAGAA TATCCGGCAC CCGGTTCCCC CGAGTTCGCG
CGGATAACAA AAGAGTTACT GGCAAAATGG GAAGTTCATG AAGATCAGGC CTGGGGTCTG
GATCACGGTA CATGGTCTGT ATTGATGCCG ATGTATCCGG AAGCAACTAT TCCTGTTTAT
CAGATGAGCC TGGATGTGCG TAAAAAACCG GAAGAGCAGT TTGCCCTTGC ACAGGATCTG
TATGAACTTC GCAAGCGGGG TGTATTGATC ATTGGCAGCG GAAACATCGT ACACAACCTG
CGCATGATGC AATGGAACGA TACAGCGTAT GACTGGGCAA GCGCCTTCAA TGCAAATGTG
AAAGACATTA TTTCAGGAAG CGATTATTCA AAACTGATCC AATACCAATC GCTGGAAAAT
TATAAATATG CAATACCAAC ACCAGAGCAT TATTTACCGT TGCTTTACAC GCTGGCATTA
AAGAAAAACA ACGACACCAT TTCGTTTTTT AATGATGTTA CAACGAACGG TTCAATTGCT
ATGACAGGGG TATTGATTCA TTCCGTATAA
 
Protein sequence
MQRRKFIKNA ALAGTAMIGL HQFARAWDNE PKVNGIMPVL FVGHGSPMNA IEQNKFNATW 
KELAAKLPTP KAIMVVSAHW ETVGTKVTAM PNPATIHDFG GFPRELHEAE YPAPGSPEFA
RITKELLAKW EVHEDQAWGL DHGTWSVLMP MYPEATIPVY QMSLDVRKKP EEQFALAQDL
YELRKRGVLI IGSGNIVHNL RMMQWNDTAY DWASAFNANV KDIISGSDYS KLIQYQSLEN
YKYAIPTPEH YLPLLYTLAL KKNNDTISFF NDVTTNGSIA MTGVLIHSV