Gene CHU_3633 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_3633 
SymbolglyA 
ID4184877 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp4187525 
End bp4188820 
Gene Length1296 bp 
Protein Length431 aa 
Translation table11 
GC content41% 
IMG OID638073620 
Productserine hydroxymethyltransferase 
Protein accessionYP_680209 
Protein GI110639999 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0112] Glycine/serine hydroxymethyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTACTG CACCTATTCG CACAACAGCA AGAGATACTC AAATTTTTGA TTTAATCTCT 
AAAGAGGCTC ACCGTCAGGA AGAAGGCATC GAATTAATTG CTTCAGAAAA TTTCACTTCA
AAACAAGTGA TGGAAGCAAT GGGAAGTGTA CTTACCAATA AATATGCTGA AGGCCTTCCG
GGCAAGCGTT ATTACGGAGG TTGCCAGGTT GTTGATCAGG TTGAGCAGAT TGCTATTGAT
CGTTTGAAAA AATTATTCGG TGCTGAATGG GCAAACGTTC AGCCACACTC CGGTGCACAG
GCAAACGCTG CGATCATGAT TGCGTGTCTG AATCCGGGAG ATTCTATTTT AGGTTTTGAT
CTTTCGCACG GTGGTCACCT TTCACATGGT TCACCGGTAA ATATGTCGGG TAAATATTTC
AAGGCACATT TCTATGGTGT AGAAAAAGAA TCCGGTCTGA TTAACATGGA TATTGTTGAA
GCAACGGCTT TAAAAGTAAA ACCTAAAATG ATCATCTGCG GAGCTTCAGC CTACTCACGT
GACTGGGATT ATGCACGCTT CCGCAAAATA GCAGACAGCG TTGGAGCTAT CTTATTAGCA
GATATTTCTC ACCCGGCCGG TTTGATTGCA AAAGGTTTAT TGAACGACCC GATCCCGCAT
TGCCACATTG TTTCTACAAC AACGCATAAA ACATTGAGAG GTCCGCGTGG TGGTGTGATC
ATGATGGGTA AAGATTTTGA AAACCCATTC GGTTTAAAAA CACCAAAAGG TGAAACACGT
ATGATGTCTA ATGTATTAGA CATGGGCGTT TTCCCGGGTA CACAAGGCGG TCCGTTAGAG
CACGTTATTG CTGCTAAAGC GGTAGCTTTC CAGGAAGCAT TATCTACGGA TTACTTACAG
TATGCAAAAC AAATTCAAAA GAATGCACAG ATCATGGCTG AAGCATTTTT GAAAAAAGGA
TACGATATCA TTTCCGGTGG TACAGACAAT CACTTAATGC TGATCGACCT TAGAAGTAAA
AACTTAACCG GTAAAGAAGC TGAAAACGCG CTGATCCGCG CAGATATTAC GATCAACAAA
AACATGGTTC CGTTTGACGA CAAATCTCCG TTTGTTACTT CAGGTATGCG TGTAGGTACA
GCTGCTATTA CAAGCCGTGG TATGGTTGGT GATGACATGA TCCGTATTGT TGAAATGATC
GATACCGTTT TAATGAACCA GACTAAAGAT TCTGTAATTG AAACTGTACG TAAAGACGTA
AACAACTGGA TGGCACAATA TCCATTATAT ATTTAA
 
Protein sequence
MITAPIRTTA RDTQIFDLIS KEAHRQEEGI ELIASENFTS KQVMEAMGSV LTNKYAEGLP 
GKRYYGGCQV VDQVEQIAID RLKKLFGAEW ANVQPHSGAQ ANAAIMIACL NPGDSILGFD
LSHGGHLSHG SPVNMSGKYF KAHFYGVEKE SGLINMDIVE ATALKVKPKM IICGASAYSR
DWDYARFRKI ADSVGAILLA DISHPAGLIA KGLLNDPIPH CHIVSTTTHK TLRGPRGGVI
MMGKDFENPF GLKTPKGETR MMSNVLDMGV FPGTQGGPLE HVIAAKAVAF QEALSTDYLQ
YAKQIQKNAQ IMAEAFLKKG YDIISGGTDN HLMLIDLRSK NLTGKEAENA LIRADITINK
NMVPFDDKSP FVTSGMRVGT AAITSRGMVG DDMIRIVEMI DTVLMNQTKD SVIETVRKDV
NNWMAQYPLY I