Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_3633 |
Symbol | glyA |
ID | 4184877 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | - |
Start bp | 4187525 |
End bp | 4188820 |
Gene Length | 1296 bp |
Protein Length | 431 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 638073620 |
Product | serine hydroxymethyltransferase |
Protein accession | YP_680209 |
Protein GI | 110639999 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0112] Glycine/serine hydroxymethyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 43 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTACTG CACCTATTCG CACAACAGCA AGAGATACTC AAATTTTTGA TTTAATCTCT AAAGAGGCTC ACCGTCAGGA AGAAGGCATC GAATTAATTG CTTCAGAAAA TTTCACTTCA AAACAAGTGA TGGAAGCAAT GGGAAGTGTA CTTACCAATA AATATGCTGA AGGCCTTCCG GGCAAGCGTT ATTACGGAGG TTGCCAGGTT GTTGATCAGG TTGAGCAGAT TGCTATTGAT CGTTTGAAAA AATTATTCGG TGCTGAATGG GCAAACGTTC AGCCACACTC CGGTGCACAG GCAAACGCTG CGATCATGAT TGCGTGTCTG AATCCGGGAG ATTCTATTTT AGGTTTTGAT CTTTCGCACG GTGGTCACCT TTCACATGGT TCACCGGTAA ATATGTCGGG TAAATATTTC AAGGCACATT TCTATGGTGT AGAAAAAGAA TCCGGTCTGA TTAACATGGA TATTGTTGAA GCAACGGCTT TAAAAGTAAA ACCTAAAATG ATCATCTGCG GAGCTTCAGC CTACTCACGT GACTGGGATT ATGCACGCTT CCGCAAAATA GCAGACAGCG TTGGAGCTAT CTTATTAGCA GATATTTCTC ACCCGGCCGG TTTGATTGCA AAAGGTTTAT TGAACGACCC GATCCCGCAT TGCCACATTG TTTCTACAAC AACGCATAAA ACATTGAGAG GTCCGCGTGG TGGTGTGATC ATGATGGGTA AAGATTTTGA AAACCCATTC GGTTTAAAAA CACCAAAAGG TGAAACACGT ATGATGTCTA ATGTATTAGA CATGGGCGTT TTCCCGGGTA CACAAGGCGG TCCGTTAGAG CACGTTATTG CTGCTAAAGC GGTAGCTTTC CAGGAAGCAT TATCTACGGA TTACTTACAG TATGCAAAAC AAATTCAAAA GAATGCACAG ATCATGGCTG AAGCATTTTT GAAAAAAGGA TACGATATCA TTTCCGGTGG TACAGACAAT CACTTAATGC TGATCGACCT TAGAAGTAAA AACTTAACCG GTAAAGAAGC TGAAAACGCG CTGATCCGCG CAGATATTAC GATCAACAAA AACATGGTTC CGTTTGACGA CAAATCTCCG TTTGTTACTT CAGGTATGCG TGTAGGTACA GCTGCTATTA CAAGCCGTGG TATGGTTGGT GATGACATGA TCCGTATTGT TGAAATGATC GATACCGTTT TAATGAACCA GACTAAAGAT TCTGTAATTG AAACTGTACG TAAAGACGTA AACAACTGGA TGGCACAATA TCCATTATAT ATTTAA
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Protein sequence | MITAPIRTTA RDTQIFDLIS KEAHRQEEGI ELIASENFTS KQVMEAMGSV LTNKYAEGLP GKRYYGGCQV VDQVEQIAID RLKKLFGAEW ANVQPHSGAQ ANAAIMIACL NPGDSILGFD LSHGGHLSHG SPVNMSGKYF KAHFYGVEKE SGLINMDIVE ATALKVKPKM IICGASAYSR DWDYARFRKI ADSVGAILLA DISHPAGLIA KGLLNDPIPH CHIVSTTTHK TLRGPRGGVI MMGKDFENPF GLKTPKGETR MMSNVLDMGV FPGTQGGPLE HVIAAKAVAF QEALSTDYLQ YAKQIQKNAQ IMAEAFLKKG YDIISGGTDN HLMLIDLRSK NLTGKEAENA LIRADITINK NMVPFDDKSP FVTSGMRVGT AAITSRGMVG DDMIRIVEMI DTVLMNQTKD SVIETVRKDV NNWMAQYPLY I
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