Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_3631 |
Symbol | rpiB |
ID | 4184875 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | - |
Start bp | 4186267 |
End bp | 4186704 |
Gene Length | 438 bp |
Protein Length | 145 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 638073618 |
Product | ribose 5-phosphate isomerase B |
Protein accession | YP_680207 |
Protein GI | 110639997 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0698] Ribose 5-phosphate isomerase RpiB |
TIGRFAM ID | [TIGR00689] sugar-phosphate isomerases, RpiB/LacA/LacB family [TIGR01120] ribose 5-phosphate isomerase B |
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Plasmid Coverage information |
Num covering plasmid clones | 42 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGTATA CAATCGCATT AGGTGGTGAC CATGCCGGTT ACACCTATAA AAAAGAAATC ATTGCATACT TAGAGACTCA GGGTCATAAA ACGATCGACT GCGGACCATT CTCTGAAGCG TCTGTAGATT ATCCTGATTT CTCTCATCCG GTAGCAGAAG CTGTTGAAAC CGGAAAAGCA ACGTTTGGAA TCCTGATCTG CGGAAGTGGT AACGGCGTTT GCATGACAGC AAACAAACAT CAGCACATAC GTGCAGGCTT ATGCTGGACT CCTGAAATAG CAATGCTTAC ACGCCAGCAT AACAACGCAA ACGTATTGTG CCTTCCGGCA CGCTTTATTC CCATTGAAGA AGCAATTGCC TGTGTAAAAA TGTTTGTAGA AACAGCATTT GAAGGCGGCA GACACGAAGG CCGCGTCAAT AAAATTGCCT GCGCATAA
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Protein sequence | MAYTIALGGD HAGYTYKKEI IAYLETQGHK TIDCGPFSEA SVDYPDFSHP VAEAVETGKA TFGILICGSG NGVCMTANKH QHIRAGLCWT PEIAMLTRQH NNANVLCLPA RFIPIEEAIA CVKMFVETAF EGGRHEGRVN KIACA
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