| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_3627 |
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| Symbol | |
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| ID | 4184871 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | - |
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| Start bp | 4179919 |
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| End bp | 4182852 |
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| Gene Length | 2934 bp |
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| Protein Length | 977 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 638073614 |
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| Product | SNF2 family DNA/RNA helicase |
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| Protein accession | YP_680203 |
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| Protein GI | 110639993 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0553] Superfamily II DNA/RNA helicases, SNF2 family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAAGTAT CAACCACTGA ACCGTTTCAA ATTATATACT CATTATTTGA GCATGAGTAT
CTGGGGTATC TGTTTGAATC TTTTGTAATT CAACTGGATC ACCAACGCAG GCTTACGCTC
AAGCATCAAA ATATTTCTGC CAAAAATGCG GATGAATTTG CGCGTGAATT AGATGATGTT
GATTTTAAAC TGATCGATTT AATTGACTCT ATTCAGCAGG AAGCTATTGT TAAAAAATTC
TATAACAAGA AAATTACACC CGCTGAATTT TTTCTAAAAA TTTACCACAA AGAAAAAGGG
GATGAACTGA TACAGGATGC GATCCGCTCC TATATTGAAT TAAAGAAAAA CCAGATCTTA
TGTCTGCTTG AAAATAAAAT GTTGTTTGAA ATGGGGCATG ATGGCGAGCC GACCTGGAAA
CGCCTGGCGC TTGCTCCGCA AAAAGCAAAT ATTTTATTTC ACTTCATGCG TAACGAAGAT
AATACGCATT ATTTTCCTAC GATTAAGTAT GACGGGCAAA AGATCGACTT CCAGTATAAA
AATGCCATCA TTGTCTGCAG CATGCCCGCG TGGCTGCTGG TTGACAATAC CGTATACCAT
TTCAATAAAG ATGTTGATGG CAATAAGTTG AAACCTTTTC TGAACAAAAA ATTTATATTG
GTTCCCCGTA AAATGGAGGA AACCTATTAT GAAAAATTTG TTACCCAGAT TGTTTCTTCT
TTTGATGTAC ACGCAAAAGG CTTTACCATA CATGCTGAAG AGTATGCGCC CAAGCCTGTA
TTGACACTTA CGGAGCTGGC AGTTGCCAAA GCACCGGTTT CGCTATTTGA TACCGCCGGA
CAGGATACGG CGGTTGATAC CGTTGAAGAA AATAAAATAC TGGTCAGTCT GGATTTCCAA
TACGGCACCT TTATCTTTTC CTCCGATAAG CTTTCTCCTT CTTTTGTTAA AATGGAGAAA
ACCGATGATT CGTATATTTT CCATAAAGTA AAACGCGATT CGGATAAAGA AAAAGATTTT
CTGGACCTGT TACGCAACTC CGATCTGGAA TTTAAAAGCG GAAAAGTAAC ACTCGACAAA
TCAAAGATAT TTTCGTGGCT CTCGGCAAAC CGCGCTGCTC TTGAAGCCCA GGGCCTGGTT
GTACGGCAGA ATTTAAAAGA TGGTAAACGC TACTTTGTAG GTGCCTCTTC TATAAGCCTG
GAAGTAAAAG AAAATAACGA CTGGTTTGAT ATCTATGCTG TTGTGCGCTT TGGTGAATTT
GAAATTCCAT TTTTAAAATT GAAGCAATAC ATTCTGAAAA AGAAAAAAGA GTTTGTATTG
CCAAATGGAG AAATTGCGGT TATACCGGAA GAATGGTTCA GTCAGTATTC AGATCTGTTT
GCCTTTATTG AAGATGATTC AGATGATCTG AAGCTGCGCA AACACCATAT GGCGCTGGTT
AAAGAACTGC AGAATGACCG CTTGGCAGAG GTTTCAATGG ACCGCAAATT AGAGCGTCTG
CGCGACTTCC AGGAAATTGA AGATTACGAT CTGCCCGCTG AGTTTAAAGG TGAATTAAGG
CCCTATCAAA AAGCGGGTTA CAACTGGATG CGCTTTCTGA ACCAATATAA TTTTGGCGGC
TGCCTGGCAG ATGATATGGG TTTGGGTAAA ACCGTGCAGA CATTGGCACT GCTGCAATCG
CTGCAAAAAA CTGCAGACGG AAAAGCAAGC TTATTAATTA TGCCTACATC ACTGGTATAC
AACTGGGAAA TGGAAGCACG GAAGTTTACG CCTGATCTGA AAATCCTGAA CTTTACAGGT
ATCAACCGCG ATAAAAATGT TGAACAGTTT CACAATTACG ACATCATAAT CACATCTTAC
GGTACGGTGC GTATCGATAT TGAATTGTTT AAACAATATC AGTTTTATTA TACCATTCTG
GATGAATCGC AAGTGATCAA AAATCCGGAA TCAATTATTG CAAAAGCCGT TAAAGAACTT
AACAGCAAAC ACCGGCTTAT CTTAACGGGT ACGCCTGTTG AAAACAGCAC GATGGATCTG
TGGTCACAAA TGACCTTTGT AAACCCGGGC TTATTAGGCA GTCAGCAGTT TTTCAGAAAT
GAGTTTTTAA ATCCGATTGA GAAAAAACAC GATGAAGTAA AAACGAAACG TTTATACAGC
ATCATCAAAC CGTTTATACT GCGCAGACAA AAATCGCAGG TTGTAAAAGA CCTTCCTGAA
AAAATTGAGA ACGTACATTA TTGTACGATG TCTCCGGAAC AGGAACAGGA GTATGAAAAA
ACAAAATCAA ATTACCGGAA TTTAATTCTT GAATCAATCG ATGAAAAGGG CTTAGCCGGC
AGTCAGATTT TATTGCTGCA GGGTTTGACA AAGCTGCGCC AGATCGCGAA TCACCCGAGT
CTGGTTGAAG ATACGTTTGA AGGAACTTCC GGTAAAATGG AAGACGTAAA TTACATGCTG
GATAATGCGC TGGAGCTTGG TCACAAAATT CTGGTGTTCT CTCAGTTTGT AAAACACCTG
CATCTGTATG CAAAGTTGCT GGATAAAGCA GGTATTAAAT ATGCATACCT GGATGGACAA
ACACGCGACA GACAGGCAGA GGTAGAACGC TTTCAGAATG AAGAAGGCAT TCGTGTATTT
TTAATTTCGT TAAAAGCCGG TGGCTTAGGT TTAAATTTAA CTGCTGCAGA TTATGTGTTC
CTGCTTGATC CGTGGTGGAA CCCGGCCGTG GAAGCACAGG CGGTTGATAG AGCGTACCGG
ATCGGACAAA AAAATACGGT GTTCACCTAT AAATTTATTA CAAAGAATAC CGTTGAAGAA
AAAATCCTCA ACCTGCAAAA AAATAAATTA AAGCTGGCAA ACGATCTGAT CAGCTCAGAA
GAAACATTCT TTAAAGCGCT AAGCAAAGAG GATATTCAGT CGATCTTTGA TTAA
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| Protein sequence | MKVSTTEPFQ IIYSLFEHEY LGYLFESFVI QLDHQRRLTL KHQNISAKNA DEFARELDDV
DFKLIDLIDS IQQEAIVKKF YNKKITPAEF FLKIYHKEKG DELIQDAIRS YIELKKNQIL
CLLENKMLFE MGHDGEPTWK RLALAPQKAN ILFHFMRNED NTHYFPTIKY DGQKIDFQYK
NAIIVCSMPA WLLVDNTVYH FNKDVDGNKL KPFLNKKFIL VPRKMEETYY EKFVTQIVSS
FDVHAKGFTI HAEEYAPKPV LTLTELAVAK APVSLFDTAG QDTAVDTVEE NKILVSLDFQ
YGTFIFSSDK LSPSFVKMEK TDDSYIFHKV KRDSDKEKDF LDLLRNSDLE FKSGKVTLDK
SKIFSWLSAN RAALEAQGLV VRQNLKDGKR YFVGASSISL EVKENNDWFD IYAVVRFGEF
EIPFLKLKQY ILKKKKEFVL PNGEIAVIPE EWFSQYSDLF AFIEDDSDDL KLRKHHMALV
KELQNDRLAE VSMDRKLERL RDFQEIEDYD LPAEFKGELR PYQKAGYNWM RFLNQYNFGG
CLADDMGLGK TVQTLALLQS LQKTADGKAS LLIMPTSLVY NWEMEARKFT PDLKILNFTG
INRDKNVEQF HNYDIIITSY GTVRIDIELF KQYQFYYTIL DESQVIKNPE SIIAKAVKEL
NSKHRLILTG TPVENSTMDL WSQMTFVNPG LLGSQQFFRN EFLNPIEKKH DEVKTKRLYS
IIKPFILRRQ KSQVVKDLPE KIENVHYCTM SPEQEQEYEK TKSNYRNLIL ESIDEKGLAG
SQILLLQGLT KLRQIANHPS LVEDTFEGTS GKMEDVNYML DNALELGHKI LVFSQFVKHL
HLYAKLLDKA GIKYAYLDGQ TRDRQAEVER FQNEEGIRVF LISLKAGGLG LNLTAADYVF
LLDPWWNPAV EAQAVDRAYR IGQKNTVFTY KFITKNTVEE KILNLQKNKL KLANDLISSE
ETFFKALSKE DIQSIFD
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