Gene CHU_3612 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_3612 
SymbolmgtC 
ID4183596 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp4167751 
End bp4168416 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content40% 
IMG OID638073599 
ProductMgtC family protein 
Protein accessionYP_680188 
Protein GI110639978 
COG category[S] Function unknown 
COG ID[COG1285] Uncharacterized membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACTTAC TTTCGGAAAT TATACGTGAA CTGCATTCTA TAGAAGTGCC TTTAATAAAA 
CTTTGTCTGT CGTTGCTGCT GGGCGCTTTA ATCGGAGCTG AGCGCGAATA TAAAAGTAAA
GTGGCCGGTT TCAGAACAAT TATTCTTATC ACGCTGGGCT CTACATTATT TACGCTTGTT
TCTGTTGCTT TAATGGGCCA GGGCGATCCT ACACGTATTG CTTCTACCAT TGTTACTGGT
ATCGGTTTTC TGGGTGCAGG TGTTATTTAT CGGGAAACCG GAACAATTAA AGGCATTACA
ACAGCAGCCG TTATCTGGGC CGCGGCTGCA ATCGGCATGA TGGTTGGTTT TGGATTATTT
GCCATATCCA TTATTTCTGT TATCCTGATC TTAATTATTC TTCTCTCTTT CTCCTGGCTG
CAACGGTATA TTGACCGTAC GAACCGGGAA AAAGTTTACC GCATACACCT GGTTAACAAT
CCGGAGCATA TTCAAACTAT GAAGCAGAAT ATTAAGTCTT TCAAGCTTAG TCCGAAGATT
ATTAATCAAG GGAAGCGCAA AGGTTTGATC TATGTTGTTA TTGAAGTAGA AGGCCCCGTA
AAGTTTCACA ACAATTTCAT GAAGTCTTTA TATGAATCTG ATTTTGTTGA ATCATTTGAA
GTATAG
 
Protein sequence
MDLLSEIIRE LHSIEVPLIK LCLSLLLGAL IGAEREYKSK VAGFRTIILI TLGSTLFTLV 
SVALMGQGDP TRIASTIVTG IGFLGAGVIY RETGTIKGIT TAAVIWAAAA IGMMVGFGLF
AISIISVILI LIILLSFSWL QRYIDRTNRE KVYRIHLVNN PEHIQTMKQN IKSFKLSPKI
INQGKRKGLI YVVIEVEGPV KFHNNFMKSL YESDFVESFE V