Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_3595 |
Symbol | fadD |
ID | 4184801 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | + |
Start bp | 4147479 |
End bp | 4149242 |
Gene Length | 1764 bp |
Protein Length | 587 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 638073582 |
Product | long-chain-fatty-acid--CoA ligase (acyl-CoA synthetase) |
Protein accession | YP_680171 |
Protein GI | 110639961 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1022] Long-chain acyl-CoA synthetases (AMP-forming) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGTTA CACGTCTTTT CGATTTAATT CCGCAGCAGA TTGCCAAGTA TCCCAAACAA GATGCACTGG CAACCAAAGA GAATGGCACC TGGATTAGTT ATTCTTCTGT GCGTGTTCAA GAAATTATTG ATAAAGTAAG TATTGGCTTT ATAAAATCGG GTTTACAAAA AGACGATAAA GTAGCCATTA TTTCACCAAA CCGTCCGGAA TGGAATTTTA TTGATCTGGG ACTGCAACAG ATAGGAGCGG TGAGTGTACC GATTTATCCG ACACTTACGG TGGAAGATTA CCGGTATATT TTTGATGACG CCGAAGTTAA AATGGTTTTT GTGTATGACG AACAATTATT TGCAAAAGCA ACAGAAGCCG TAAACGGTTC CAGAACAAAT CCTGTAATAT ATACCTTGCA GGATGTGAAC GGAGCGAAAA GCTGGAAAGA TATCACGGCA CTGGCAGACG GCCAACCGGC TTCGATGCTT GATCCATATA AGGCAAATGT ATTTAACGAC GATCTGCTTA CCTTGATTTA TACGTCCGGA ACTACAGGTA AGCCCAAGGG TGTTATGCTT ACACATAACA ATATATTAAG CAATGTACTG GCAGCGATTC CGCTGATGCC GGTTAATCAC AATCATAAAG CACTTAGTTT TTTACCGTTG TGCCACGTGT ATGAACGCAT GTTGTGTTAT CTGTACCTGT CTCAGGGGGT ATCTATCTAT TATGCAGAAA GTACAGATAC AGTTGGCGAA AATTTAAAAG AAGTGCAGCC GCACATGTTT GTTACGGTGC CAAGGCTGCT TGAAAAAGTA TACGATAAAA TTGTTGCTAA GGGCGCTGAA CTTACGGGCA TTAAAAAATT CCTCTTCTAT TGGGCACTTG AGCTGGGGTT AAAATATGAT ATGCAGAAAA ATCAAGGCTT CTTTTATAAC ATTCAACTGA AGCTTGCCAA TAAAATAATC TTCAGTAAAT GGCGAGAAGC ATTGGGTGGG AATGTGATTA CCGTTGTTTC AGGCGGTGCT GCCTTACAGC CTCGTTTGGC GCGTGTTTTC TGGGCGGCGC AGATTCCGGT GATGGAAGGT TACGGTTTAA CAGAGACGTC GCCGGTGATT GCCGTAAACA GATTCAATCC GGATGAAACA CGAATCAGTA CTGTTGGTCC GCTGTTGCCC GGAGTAGAAG TGAAGATCGC GGAAGACGGA GAAATCCTGA CGCGCGGACC GCATATTATG AAAGGATACT ACAAACGGCC GGATTTAACG GCCGAAGCAA TTGACAGTGA AGGCTGGTTT CACACAGGAG ATATCGGTCA GTTTGTAGAA AATAAATATT TAAAGATCAC CGACCGTAAA AAAGAAATGT TTAAAACCTC GGGTGGTAAG TACATTGCAC CGCAGCTGGT TGAAAATAAA TTTAAAGAGT CGCGCTACAT TGAACAAATA ATGGTGATTG GTGAAGGGGA GAAATTCCCT TCTGCGATTG TGGTGCCGTC GTTTGCAGAT GTAAAAAGCT GGTGTGAGAT CAAAGGCATT CCGTATACGA CAAACGAAGA AATGGTTTGC AATGCACAGG TGATCGAAAA ATTCCAGAAA GAGTTTGACG AAATGAATGA AAACTTTGCA CAGTATGAAC GTGTAAAGAA ATTCATTTTA ATGCCAAGGC CATTTACGAT AGAGAGCGGA GAAATGACAC CGACATTGAA ATTGAAACGT AAGATCATTA TGCAGAATTG CCAGGGCCAG ATAGAGAAGA TGTATGCGAG GTAG
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Protein sequence | MAVTRLFDLI PQQIAKYPKQ DALATKENGT WISYSSVRVQ EIIDKVSIGF IKSGLQKDDK VAIISPNRPE WNFIDLGLQQ IGAVSVPIYP TLTVEDYRYI FDDAEVKMVF VYDEQLFAKA TEAVNGSRTN PVIYTLQDVN GAKSWKDITA LADGQPASML DPYKANVFND DLLTLIYTSG TTGKPKGVML THNNILSNVL AAIPLMPVNH NHKALSFLPL CHVYERMLCY LYLSQGVSIY YAESTDTVGE NLKEVQPHMF VTVPRLLEKV YDKIVAKGAE LTGIKKFLFY WALELGLKYD MQKNQGFFYN IQLKLANKII FSKWREALGG NVITVVSGGA ALQPRLARVF WAAQIPVMEG YGLTETSPVI AVNRFNPDET RISTVGPLLP GVEVKIAEDG EILTRGPHIM KGYYKRPDLT AEAIDSEGWF HTGDIGQFVE NKYLKITDRK KEMFKTSGGK YIAPQLVENK FKESRYIEQI MVIGEGEKFP SAIVVPSFAD VKSWCEIKGI PYTTNEEMVC NAQVIEKFQK EFDEMNENFA QYERVKKFIL MPRPFTIESG EMTPTLKLKR KIIMQNCQGQ IEKMYAR
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