Gene CHU_3582 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_3582 
Symbol 
ID4186789 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp4132908 
End bp4133606 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content38% 
IMG OID638073569 
Producthypothetical protein 
Protein accessionYP_680158 
Protein GI110639948 
COG category[S] Function unknown 
COG ID[COG2968] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.0237559 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCATC TAATTACTTC AATCGTTTTT ATCTGTACAA TCGGCGCAGC GTTTGCGCAG 
GTACCGGGTC CTGTTCAAAA GAGAATTTCC GTAACCGGTA CTGCCGAAAT GGAAGTCGTT
CCCGACGAAA TTTATTTCAG GGTGGTGATT AAAGAGTATT TAAAAGACAA AAATAAAGTT
GTGATTGAAA AGCTTGAAAA AGAATTAAAC CAGGCTGTAA CTGCTGCCGG CATTACAAAA
GAAGACTTTA TGGTTGAGCA GGTGAATGGC TTAAGCTGGA GCAGAAAAAA GAAAGATGGT
GCTGAATTGT ACAATTCTAA AAGCTATATC ATTAAAGTAT CAACCCCTGG AAAGATGGAC
GAAATACTGG ATAAAGTAAA TGCAGAATCC ATCTACTCGG TTGAAATCCG GAATTATTCG
CATTCTAAAA TTACAGAATA CAAAAAACAA TTAAAAATCG AAGCCATCAA AGCGGCTAAA
GCAAAAGCAA CATATCTGCT TGAAGCGATC GATGAGAAAA TCGGTGGTGC TGTTGAAATA
AGTGAATACG ATAATATCTC CTATAATCAA CCTGTTTATT CGAACCAGGT GAATGTTCGC
AACTCCATGA GCTACCAAGA AAGCTACGCG GATTCAGATA TAGGTTTTCA GAAAATCAAA
TTACAGTTTC AGGTGAATGC AACGTTTGCC ATTCAATAA
 
Protein sequence
MKHLITSIVF ICTIGAAFAQ VPGPVQKRIS VTGTAEMEVV PDEIYFRVVI KEYLKDKNKV 
VIEKLEKELN QAVTAAGITK EDFMVEQVNG LSWSRKKKDG AELYNSKSYI IKVSTPGKMD
EILDKVNAES IYSVEIRNYS HSKITEYKKQ LKIEAIKAAK AKATYLLEAI DEKIGGAVEI
SEYDNISYNQ PVYSNQVNVR NSMSYQESYA DSDIGFQKIK LQFQVNATFA IQ