Gene CHU_3552 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_3552 
Symbol 
ID4184389 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp4105346 
End bp4105630 
Gene Length285 bp 
Protein Length94 aa 
Translation table11 
GC content34% 
IMG OID638073539 
Producthypothetical protein 
Protein accessionYP_680128 
Protein GI110639918 
COG category[R] General function prediction only 
COG ID[COG4980] Gas vesicle protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.00139004 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0763247 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTCAG GAAAAGTATT ATTAGGAGTA TTAGCAGGTA TCGCTGCAGG TGCATTAGTA 
GGAACATTAT TAGCGCCGGA AAAAGGTTCA GACACAAGAA AAAAATTATT GAGCAAAGGG
GATGATTATC TTGATGAGAT CAAAGATCAG TTCAATGAAT TGCTTGGTTC TTTGAAAAAT
AAATTCGAAG AGAAATCTGA AGAAGCACAA GAGGCTTACG GAAAAGGCAA AACTAAATTC
AACGAAGCTA AGAATGAATT TAAAAATTCA ATGGCTGAAT TATAA
 
Protein sequence
MSSGKVLLGV LAGIAAGALV GTLLAPEKGS DTRKKLLSKG DDYLDEIKDQ FNELLGSLKN 
KFEEKSEEAQ EAYGKGKTKF NEAKNEFKNS MAEL