Gene CHU_3541 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_3541 
SymbolcusS 
ID4186595 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp4096437 
End bp4097783 
Gene Length1347 bp 
Protein Length448 aa 
Translation table11 
GC content34% 
IMG OID638073528 
Productsensor kinase of copper sensing two-component system 
Protein accessionYP_680117 
Protein GI110639907 
COG category[T] Signal transduction mechanisms 
COG ID[COG2205] Osmosensitive K+ channel histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0485338 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.197924 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCTACTAG AACTGTTTTT AAAAGGCATT AATTCAAAAA TCGAATCCAT CGATGCAAAA 
CGTATTTACT TTGTAAATGT TTTGTCTTTG TTATGTTTGT TTACATCCAT AGCAATTGTC
ATTCCTTACA TAATACTTAA CCTGCACGTG CTTGCCGGAG TGTGCGTGAT TTTTTCTGCC
GGTTATGTAA TCAGCTTTAA TTTTAATGCA CGGGGTTTGT ATAGTGTTGC CAAATCATTT
TTATTTTCAA CAATAGCCAT AAACATCTTT GCCTTATCGG TAATCTTCGG AAGCAGAATA
AATATGACTG TTTTTTATAT TCCGTTAGTG GTAATTTTGT TTTTGCTATT TGACAAAGAA
CACAGAGCTG CATTTTTTGT TTCAATCATT GTTGTAATAG CTATGTGTAT ACTGGGCTTT
GTGATGAATA ATTTTACCGT GAGTTCTTTA ATGGTTTTAG AAGAAACAGA GATTTTTATT
ATTAATACGA TATTCAGCGG AGTGTCGTTG TTTGGTACAT TATTCGTTTG TTATGTATTT
ATTTTTTCTT CAGAACTGCT GCTAAAGGGT TTGGCAAAAA AAAATGAACG CTTGCAGCAG
GAGCGTAATG CACTCTATGA ATCTACCATT CAATTAAATA AGACAGCACA AGAGCAGGAA
GACCTGAATA CGTTAAAAAA TAAATTGTTA TCCATCATTT CGCATGATGT GCGCCAGCCG
GTAAACAATC TGTTGAGTCT TTCAGAAATT ATGCTTCAGG CAAAAATATC AGAAGAAGAA
ATTCAGCTGC TTGGGTTACG GTTAAAGGAA ACATCTATTT ATGTATATCA AATGCTGGAC
AATCTCCTTA CCTGGTCCTA TTCTCAAATG AATGGCTTAC ATCCTGAGCC TATAAAACTG
ATTCTGAAAG AGGATATTGA AAAGGAACTG AAGAACCTCT CGTATTTAAT AGATCAAAAG
AAAATCCATA TTGAATTAAA CGTGAACGAT GCTGACCACA TTCAATTTGA TAAAGTAATG
TTTCAGATCG TATTTAGAAA CATTGTGAGC AACGCAATAA AATTTTCTCA GGCAGAAGGC
CGTATTAGAA TTAACACAGA AAAAGCAGAC AATAAAATTG CCTTATCAAT AAGTGATGAT
GGGATTGGTA TTCCAAAGGA AATTATGGAA AAGCTTTTTG TAAATAATTT CTCTAAAAAC
AGATTTGGCA CACAAAATGA AAAAGGGGCA GGTATTGGTT TGATGTTGTG CAAACAGCTG
ATGGATGCAA ACAATTCAGA AATAAAGGTT AAATCCAATT TGGGCAAAGG CTGTACGTTT
GTACTTATTT TTCCTGCAGG CTCTTAA
 
Protein sequence
MLLELFLKGI NSKIESIDAK RIYFVNVLSL LCLFTSIAIV IPYIILNLHV LAGVCVIFSA 
GYVISFNFNA RGLYSVAKSF LFSTIAINIF ALSVIFGSRI NMTVFYIPLV VILFLLFDKE
HRAAFFVSII VVIAMCILGF VMNNFTVSSL MVLEETEIFI INTIFSGVSL FGTLFVCYVF
IFSSELLLKG LAKKNERLQQ ERNALYESTI QLNKTAQEQE DLNTLKNKLL SIISHDVRQP
VNNLLSLSEI MLQAKISEEE IQLLGLRLKE TSIYVYQMLD NLLTWSYSQM NGLHPEPIKL
ILKEDIEKEL KNLSYLIDQK KIHIELNVND ADHIQFDKVM FQIVFRNIVS NAIKFSQAEG
RIRINTEKAD NKIALSISDD GIGIPKEIME KLFVNNFSKN RFGTQNEKGA GIGLMLCKQL
MDANNSEIKV KSNLGKGCTF VLIFPAGS