| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHU_3540 |
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| Symbol | rcsC |
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| ID | 4186594 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cytophaga hutchinsonii ATCC 33406 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008255 |
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| Strand | + |
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| Start bp | 4095078 |
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| End bp | 4096418 |
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| Gene Length | 1341 bp |
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| Protein Length | 446 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 638073527 |
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| Product | sensor for ctr capsule biosynthesis, histidine kinase acting on RcsB |
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| Protein accession | YP_680116 |
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| Protein GI | 110639906 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.168985 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.341625 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATAAAA TTTTTTCACC AAAAATACTT ACGGAAAACA GCATAGACGC AAAGCGCAAT
TTCATTGCTA AAGTGACAAT TGCGCTTTGC TTTGTATTAA GTGTTGGCTT TTCGATTGTA
TTTTTTATAC AAAAGATTTA TCCTTTAAAT ATTATTTTTG CATTTTTCTC TATTGTATAT
GTGATTGCAT GGTCCATGTA CGAGCTTAAA AACCCGCTGG CCGCAAAGGT TATGCTATAT
AGTGCAATGC TGGCGCAGGT TTTTTTTATG GCAATTGTGT TAGGTGTTTT CGTTGAGATT
AAAGTGTTCT TTATACCAAT CGCAATTGTG CCCTTATTGA TTTTTTCAAA AAAAGAGAAA
GTGCCAATGT ACGCACTGCT GATCCTCACA GCAGTCAATA TTGTTATGAT CAATACATTT
GTTCACCGGA TTTATGGTCC GGAACAGATT TATTCATTTG AAACATACAG AAATATAAAT
AATGCATTCG ACATAACATC GATGCTTTGT ATGGTTATCC TTGCCTTTTT ATTCCTTCAA
CTGACTGAAG CCGGAGAGAT AGAATTAATA GATGCGAATA AAGCTCTGTC AAAACAAAAG
GAAGTAGAAC TTCAAAATAA TTTTTTATTA AAACGGGCAA AGGAAGACCA GGAGCGAATG
AATCTTATGA AAGATCATTT GTTCCGCATC ATCTCTCACG ATCTGAGAAG CCCGATAAAC
ACAATCCATG GGTTAACAGA ATTATTGATC AGTAAAAAAT TATCAAGAGA AGAAGAAACC
GTTATAACGG AACAATTAAA AAAATCTACC GACAGCACCA ATCAGTTGCT GGACAATTTA
CTAAGCTGGT CTGCATTTCA GATTAATAAT GCCTCGAAGC CTAACATTGT AGAGGTTAAC
ATTAAAGAAC TCATCAACGA CATCTTTAAG CAGCTTGATG TAAAGCTTAC GCAAAAAAAT
ATTTCGATTA TTGAAAAAAT AGATCACACT ATTTTTATTC AGGCAGACTC AAGCATGCTT
GAAATCGTTA TCCGGAATAT TATTTCAAAT GCTATAAAAT TCAGCTATCA GGAACAGGTT
ATTCATGTGC ATGCGGAAAT TGCTGATAGA GATTTAGTTA TTCAGGTTAA AGATTCAGGT
ATTGGTATGC CGAAAGAAAT ACTGGACAAA CTTTTTACAA ATGATAAATC TGTAAGCAGG
GCAGGCACGT ATAACGAAAA AGGATCAGGG ATTGGCTTGC TGCTGTGCAA AAATCTCCTT
GAAAACTGCG GCGGAAAAAT CGAAGCTAAA AGTATCCCCA AACAGCAAAC GATATTTACC
ATTAAGCTCC CAATGAATTA A
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| Protein sequence | MNKIFSPKIL TENSIDAKRN FIAKVTIALC FVLSVGFSIV FFIQKIYPLN IIFAFFSIVY
VIAWSMYELK NPLAAKVMLY SAMLAQVFFM AIVLGVFVEI KVFFIPIAIV PLLIFSKKEK
VPMYALLILT AVNIVMINTF VHRIYGPEQI YSFETYRNIN NAFDITSMLC MVILAFLFLQ
LTEAGEIELI DANKALSKQK EVELQNNFLL KRAKEDQERM NLMKDHLFRI ISHDLRSPIN
TIHGLTELLI SKKLSREEET VITEQLKKST DSTNQLLDNL LSWSAFQINN ASKPNIVEVN
IKELINDIFK QLDVKLTQKN ISIIEKIDHT IFIQADSSML EIVIRNIISN AIKFSYQEQV
IHVHAEIADR DLVIQVKDSG IGMPKEILDK LFTNDKSVSR AGTYNEKGSG IGLLLCKNLL
ENCGGKIEAK SIPKQQTIFT IKLPMN
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