Gene CHU_3539 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_3539 
Symbol 
ID4186593 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp4094080 
End bp4095042 
Gene Length963 bp 
Protein Length320 aa 
Translation table11 
GC content40% 
IMG OID638073526 
Producthypothetical protein 
Protein accessionYP_680115 
Protein GI110639905 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.901447 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.536891 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATAA AGTACCTATT CCCATCTGTT ATAATTTTTG GAACAGTATT CTTTTCCTGT 
ACAGAAACTA AAACGGTAGA AAATGCGGAA ACAAAAGACA CAATAAAAAA TGCAACGGTT
CAAATCGCAG CTATTGGTGA CAGCGCGTAC ACACTTGCTT TTGGTGATAT ACAGGCATTG
ATTGATTATA AAAACGGCGG AAGATTAGAA GCGTTTTCGT TAAGCGGAAC AAATATTTTA
TCCGGCAAAA CAGTTAATGC CGGAAACTGG GGAACATCTA TGTGGCCTAG TCCGCAACGC
GCATGGGGAT GGCCGCCTTC ACAACAATTA GACAATCTGG CGTATACCGT TTTACAGGAT
TCCGGAGCGG TGGTATTAAA AAGTCAAAAA GATCCGAAAC AGGGATTTGT ATTTACAAAG
GCATACAGCA TTGACACAAA AGACACATCG TTAATTATAA CCTATACAAT TTTAAACGAT
ACAACAGTTG CACAAAAAGT TGCTGGCTGG GAAATTTCAA GAGTAGCACC GGGCGGCTTA
ACATTCTATC CATCCGGCGA CGAGGCTAAA CGCGGACAGC TGGCACCGTT AACCAAAGAT
ACATTAGGTG TTACCTGGTT TGAATATAAA GCCGCAACAA TTCCGTCCGG TGTGCCTAAA
TTATTGGCAG ACGGAAAAGA AGGCTGGCTT GCACAGGCAA AAGGTGCGCT ATTATTAGTA
AAAACATTTG AAGATGTAGC AACAGGGAAA TATGCACCGG AAGAAGGTGA AATTGAATTA
TATGCGAACC CGGATCACAG CTACATTGAA ATTGAACAGC AAGGTACGTA TGTTCAATTA
AAAGCCGGAG AAACATTAAC ATACGTTGTT AGATATAAAC TTGTAAAAAT ACCGTTGGAA
TTAGCGCTTA TAGCAGGCAA TTCTGAATTG TTGAAAATTA CACGTAGCGT AGTGAAAAGG
TAA
 
Protein sequence
MKIKYLFPSV IIFGTVFFSC TETKTVENAE TKDTIKNATV QIAAIGDSAY TLAFGDIQAL 
IDYKNGGRLE AFSLSGTNIL SGKTVNAGNW GTSMWPSPQR AWGWPPSQQL DNLAYTVLQD
SGAVVLKSQK DPKQGFVFTK AYSIDTKDTS LIITYTILND TTVAQKVAGW EISRVAPGGL
TFYPSGDEAK RGQLAPLTKD TLGVTWFEYK AATIPSGVPK LLADGKEGWL AQAKGALLLV
KTFEDVATGK YAPEEGEIEL YANPDHSYIE IEQQGTYVQL KAGETLTYVV RYKLVKIPLE
LALIAGNSEL LKITRSVVKR