Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHU_3536 |
Symbol | yiaD |
ID | 4186590 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cytophaga hutchinsonii ATCC 33406 |
Kingdom | Bacteria |
Replicon accession | NC_008255 |
Strand | - |
Start bp | 4091609 |
End bp | 4093126 |
Gene Length | 1518 bp |
Protein Length | 505 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 638073523 |
Product | outer membrane protein |
Protein accession | YP_680112 |
Protein GI | 110639902 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.624164 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATACGCA AGCAAATAGG TTTTCTTTTT ATATTTCTTT TATCCGTTTC ATTTGGTCAT GCGAATAAAA TTAATGCCCT GGCGTTAAAA AACGGTTGCA GCATTATACA AAAACCTTCT ACATTTTTTA CACCTACACC ATATGCTGCT AAAATAAATG ATTGGTCGGT TTTTGGTTTA CTGGATCAAA ACGCTGCTAC TGGCTGGTGT TCGGGCGCAA CATCCAAAGT GCCGTATGTA TTTGTCTTTG AATTATCGGA AGATTTTCTG ATCAGCAATT TTGCATTCAA TACATTTTGC CAGAAAGAAT ATAAAAACAT CAGTGCCAAA GATATTAAAG TTGAATATTC AATGACCTCG GCCAAGTCTG GCTTTCTGCC TGCAGCAACG TATCTGCTGG AAGAAAATAA ATACAATTCC TTTGATATTG CGCCCGTAAA AGCCCGCTGG ATTAAACTTA CCATTTTATC AAACTACGGA AACCTGCAAT GGACGGAGTT AATGGAGTTT GAAGCATGGG GCACATTTGT TACACCTGGT GTTACTGCTG CTTCTATCAC AGGTGTTTGG AATACCAACT TTGATTGGGT AAGTATTAAT AAAGTTGCAA ACGGAACCAT ATATGGCTGC TACAAATGGA AAAACGGAGA AATATATCTG ACACAGGTTA GCCGGAAAAC ATACACATTC GCCTGGAAGC AAAACGACGA TGAGAAACTT TCTGGTTGGT GTTTACTTGT ATTGAATAAA GAAGGAACAA AGATGAACGG CATCTGGGGG TATGGCACTG ATACAACAAA GTTTGGTTAC TGGGAATTTT CTAAACTGCA AAGTACGCCG TATGCATGCA GCAACGATGC AATTGCCGCG GCAGGTATTG TTAAAAAAGA ACCGGTAAAA ACAGAGCCCA AGCTTAATGT AATGATCGAA ATCATTGATA AAAGTTCTAC AAAACCTATT GATGGGCATA TTGATATTTA TTCGCAGGCA ACATCTGTAA GTGTGATTTC AAAAGAAGGA TTATATAGTA CCGATATTTC TGTAGCACCT TATGTTATTG TCAAAACATT TCTGCCTTCC TACTATCCAA CACTTGATAC ATTTGTGATT ACTGCTGCCG AACAAAAGGC GCTGTATGCC ACACGTATCA TTGAGTTATC AAAACTATCT TCAGGTACAA ACATTTTGCT GCACAATGTG CTTTTTGAAC GTACCAGCTA TGAGCTGCTA TCTTCTTCGC TACCAGCGCT TGATCAATTA GTTACAGTAA TGAATCAGTA TCCGGGTATG ATCATCGAGC TTTCAGGACA TACGGATAAT GTGGGCAGTG CGAAAAAAAA TATGGAGTTG TCAAAAAATC GTGTTGAATC TGCAAAAAAA TATCTGGTAA GCAAAGGCAT CAGCGCCGAC CGCATTAAAA GTGTTGGTTA CGGAAGCAAA TATCCTGTGG CCAGCAATGA TGGTGAACAA ACCAGAAAAT ACAACAGACG TGTTGAACTC CGCATTATAA CCATGTAG
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Protein sequence | MIRKQIGFLF IFLLSVSFGH ANKINALALK NGCSIIQKPS TFFTPTPYAA KINDWSVFGL LDQNAATGWC SGATSKVPYV FVFELSEDFL ISNFAFNTFC QKEYKNISAK DIKVEYSMTS AKSGFLPAAT YLLEENKYNS FDIAPVKARW IKLTILSNYG NLQWTELMEF EAWGTFVTPG VTAASITGVW NTNFDWVSIN KVANGTIYGC YKWKNGEIYL TQVSRKTYTF AWKQNDDEKL SGWCLLVLNK EGTKMNGIWG YGTDTTKFGY WEFSKLQSTP YACSNDAIAA AGIVKKEPVK TEPKLNVMIE IIDKSSTKPI DGHIDIYSQA TSVSVISKEG LYSTDISVAP YVIVKTFLPS YYPTLDTFVI TAAEQKALYA TRIIELSKLS SGTNILLHNV LFERTSYELL SSSLPALDQL VTVMNQYPGM IIELSGHTDN VGSAKKNMEL SKNRVESAKK YLVSKGISAD RIKSVGYGSK YPVASNDGEQ TRKYNRRVEL RIITM
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