Gene CHU_3536 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHU_3536 
SymbolyiaD 
ID4186590 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCytophaga hutchinsonii ATCC 33406 
KingdomBacteria 
Replicon accessionNC_008255 
Strand
Start bp4091609 
End bp4093126 
Gene Length1518 bp 
Protein Length505 aa 
Translation table11 
GC content39% 
IMG OID638073523 
Productouter membrane protein 
Protein accessionYP_680112 
Protein GI110639902 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.624164 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATACGCA AGCAAATAGG TTTTCTTTTT ATATTTCTTT TATCCGTTTC ATTTGGTCAT 
GCGAATAAAA TTAATGCCCT GGCGTTAAAA AACGGTTGCA GCATTATACA AAAACCTTCT
ACATTTTTTA CACCTACACC ATATGCTGCT AAAATAAATG ATTGGTCGGT TTTTGGTTTA
CTGGATCAAA ACGCTGCTAC TGGCTGGTGT TCGGGCGCAA CATCCAAAGT GCCGTATGTA
TTTGTCTTTG AATTATCGGA AGATTTTCTG ATCAGCAATT TTGCATTCAA TACATTTTGC
CAGAAAGAAT ATAAAAACAT CAGTGCCAAA GATATTAAAG TTGAATATTC AATGACCTCG
GCCAAGTCTG GCTTTCTGCC TGCAGCAACG TATCTGCTGG AAGAAAATAA ATACAATTCC
TTTGATATTG CGCCCGTAAA AGCCCGCTGG ATTAAACTTA CCATTTTATC AAACTACGGA
AACCTGCAAT GGACGGAGTT AATGGAGTTT GAAGCATGGG GCACATTTGT TACACCTGGT
GTTACTGCTG CTTCTATCAC AGGTGTTTGG AATACCAACT TTGATTGGGT AAGTATTAAT
AAAGTTGCAA ACGGAACCAT ATATGGCTGC TACAAATGGA AAAACGGAGA AATATATCTG
ACACAGGTTA GCCGGAAAAC ATACACATTC GCCTGGAAGC AAAACGACGA TGAGAAACTT
TCTGGTTGGT GTTTACTTGT ATTGAATAAA GAAGGAACAA AGATGAACGG CATCTGGGGG
TATGGCACTG ATACAACAAA GTTTGGTTAC TGGGAATTTT CTAAACTGCA AAGTACGCCG
TATGCATGCA GCAACGATGC AATTGCCGCG GCAGGTATTG TTAAAAAAGA ACCGGTAAAA
ACAGAGCCCA AGCTTAATGT AATGATCGAA ATCATTGATA AAAGTTCTAC AAAACCTATT
GATGGGCATA TTGATATTTA TTCGCAGGCA ACATCTGTAA GTGTGATTTC AAAAGAAGGA
TTATATAGTA CCGATATTTC TGTAGCACCT TATGTTATTG TCAAAACATT TCTGCCTTCC
TACTATCCAA CACTTGATAC ATTTGTGATT ACTGCTGCCG AACAAAAGGC GCTGTATGCC
ACACGTATCA TTGAGTTATC AAAACTATCT TCAGGTACAA ACATTTTGCT GCACAATGTG
CTTTTTGAAC GTACCAGCTA TGAGCTGCTA TCTTCTTCGC TACCAGCGCT TGATCAATTA
GTTACAGTAA TGAATCAGTA TCCGGGTATG ATCATCGAGC TTTCAGGACA TACGGATAAT
GTGGGCAGTG CGAAAAAAAA TATGGAGTTG TCAAAAAATC GTGTTGAATC TGCAAAAAAA
TATCTGGTAA GCAAAGGCAT CAGCGCCGAC CGCATTAAAA GTGTTGGTTA CGGAAGCAAA
TATCCTGTGG CCAGCAATGA TGGTGAACAA ACCAGAAAAT ACAACAGACG TGTTGAACTC
CGCATTATAA CCATGTAG
 
Protein sequence
MIRKQIGFLF IFLLSVSFGH ANKINALALK NGCSIIQKPS TFFTPTPYAA KINDWSVFGL 
LDQNAATGWC SGATSKVPYV FVFELSEDFL ISNFAFNTFC QKEYKNISAK DIKVEYSMTS
AKSGFLPAAT YLLEENKYNS FDIAPVKARW IKLTILSNYG NLQWTELMEF EAWGTFVTPG
VTAASITGVW NTNFDWVSIN KVANGTIYGC YKWKNGEIYL TQVSRKTYTF AWKQNDDEKL
SGWCLLVLNK EGTKMNGIWG YGTDTTKFGY WEFSKLQSTP YACSNDAIAA AGIVKKEPVK
TEPKLNVMIE IIDKSSTKPI DGHIDIYSQA TSVSVISKEG LYSTDISVAP YVIVKTFLPS
YYPTLDTFVI TAAEQKALYA TRIIELSKLS SGTNILLHNV LFERTSYELL SSSLPALDQL
VTVMNQYPGM IIELSGHTDN VGSAKKNMEL SKNRVESAKK YLVSKGISAD RIKSVGYGSK
YPVASNDGEQ TRKYNRRVEL RIITM